Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L5.20.v1.A.nonSL6-1

Possible name(s)

COMT; LRTOMT

Gene model

KH2012:KH.L5.20

Location

KhL5 [110,262 / 115,467]

Sequences

Amino acid sequence

Length: 309

>KH.L5.20.v1.A.nonSL6-1
KANTMANKATIYPGEMLLYPSLYGPEEYAICVLACFIGFVMIKHLIFHTGYFWWYSYGRF
YIPDTFWTTVTGKPLSKRLLNYVHNRFPNEQEKKINIEEMLNVVDDYFKTKEFGPSLSNT
KGKIIDGIVSSHMPKSVLVVGCHAGYVLLRIMRNLPRSSKVIVIEPCKQNMEAARSLVKM
VGMDEQVTFIASEASSVIPNLALDYGVDKFDFIFLNRTKHNEPSHLPLLKLLEGEGNKGE
SYMHSAADSAGDSKPQTVIIADKVVLLGDPDYLKYVRDSNNYETQYFQMSLEHTSEEIVD
GMEKATFLG

Nucleotide sequence

Length: 1,538

>KH2012:KH.L5.20.v1.A.nonSL6-1
AAGTGTTTGTTGGTGGTTACGTTCATTTGGTAAAATATATCGTGGGTGTTGGACGTATTT
CGCTATAGAATATAACCTAAGATTCCAAGAAATTGTTGCTCGGAGTGAAAAGCTAATACG
ATGGCAAATAAAGCAACGATATATCCTGGGGAAATGTTGCTCTACCCTTCTCTATACGGA
CCTGAAGAATACGCGATATGCGTGTTAGCATGTTTCATTGGGTTTGTGATGATAAAACAC
TTGATATTTCACACTGGGTACTTCTGGTGGTATTCTTATGGGCGGTTTTATATCCCTGAT
ACTTTCTGGACCACTGTAACAGGCAAACCGTTGTCAAAGCGGTTGTTGAACTACGTGCAC
AATAGATTTCCAAACGAGCAAGAGAAAAAGATCAATATTGAAGAAATGTTGAATGTGGTT
GACGATTATTTCAAAACTAAAGAGTTTGGACCTAGCTTAAGCAATACTAAAGGCAAAATA
ATCGATGGCATTGTATCATCCCACATGCCTAAGTCAGTGTTAGTGGTTGGTTGTCATGCG
GGCTACGTCTTGTTGCGAATCATGCGAAACTTACCTCGAAGTAGCAAAGTAATTGTTATT
GAGCCGTGTAAGCAAAACATGGAAGCTGCAAGATCGCTTGTTAAGATGGTGGGAATGGAT
GAACAGGTTACATTTATAGCAAGTGAAGCAAGTTCAGTCATCCCAAACCTCGCCCTGGAT
TATGGGGTCGATAAGTTTGACTTTATATTTCTGAACCGAACTAAACATAACGAACCTTCA
CACTTGCCTTTGCTGAAGTTACTTGAAGGGGAGGGCAACAAAGGTGAGAGCTACATGCAT
TCCGCTGCAGATTCGGCCGGCGACTCAAAACCACAGACCGTTATAATTGCAGACAAAGTT
GTCCTTTTGGGCGACCCAGATTATTTGAAATATGTTCGTGATTCAAATAATTACGAAACA
CAATATTTCCAAATGTCCTTGGAGCATACAAGTGAAGAAATAGTGGATGGGATGGAAAAA
GCGACATTTTTAGGATAAAAATAATTTGTTTTGTTTCCACCACACATAACGTAATATTAG
AAAAGCTGTTTTGTTGAAAATGTTAACATTATTATGTTCAATTTTGTTAGTAAACAAAAT
GTGTTTTTTTTATTGGTGAAAAAATTATTATTTTTATTACTTTACAGGTATTTCTTATAA
ACACTTTGCTTAACAATGTATTTAACATGTTAGTAAGCTTATACGTTTTATTATATGAGT
TAAATAAATGGTAAAAACTACTCTTAAATGAATATAACTTACTTTATCCTCGCGCGACCG
GAAACGACAGTCGTTTTAACACGTGTCCCATGTTACCCCACCGTACAATACGTCTATATG
TGGTAACTCGTAAGCTGGCACGAGGTTCCACAAGAACATTTTGCTCGACGACGATAAACG
ATACTCAGCCCAAAATGTATAGTAGGATGGGGGAAAATGGGACACATTTAGCACATAATA
TTCAAATATCCTGATCGTTTTTTAAACAATAAACAACG

InterProScan

ProSiteProfiles	O-MeTrfase_3 (IPR002935) - T[77-308] 19.382
SUPERFAMILY	SAM-dependent_MTases (IPR029063) - T[78-288] 9.92E-19
Pfam	O-MeTrfase_3 (IPR002935) - T[117-232] 1.4E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COMT_HUMAN	30 %	121	9.96E-33