- Molecular Tool 'cicl27n09-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.L50.6.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L50.6.v1.A.SL1-1
Possible name(s)
DLK2; DLL1
Gene model
Location
KhL50 [33,065 / 36,629]
Amino acid sequence
Length: 488
>KH.L50.6.v1.A.SL1-1
NTTMSIKLILLLCSVAIGLAVGKPTDTTTCPSRCNLSHGFCNPRQQCTCFPGWEGPECNQ
CSTLIGCLHGSCDRPGQCNCDVGWGGRKCDRDLQYCERHRPCRNGATCINNLLGGFKCIC
PTGLTGTTCQETATTTPPITPRSGGKPRCSNGGTCIRGNAELGCESCRCPTGFTGQLCEQ
IVRMCVMRPCANGGKCQDVIGNFRCDCAHGYRGRYCTEDINECTVLGRHACENGGTCVNR
FGGYTCACSDGYYGSRCQSKIIQIQARVTTTVKPTTTTTTTTTTEATTTKSTTETLKEIV
VVPNLKKPFRKNIKVTHIVRQVEVETSNGDMTFIRDVVDHQGPNSAENEAQSSVTTVQAL
TFAFLGVAIALFIGIVIFMWIHCSKKGRNLRQRCTGESPTEETPMNENSREPSIVKTRHA
SYSPPQYVLEECQPKPGYPMRSVALPSDDREPIDCLYVALPNNSTPDVASMANRVLNSPS
LPAYDERY
Nucleotide sequence
Length: 1,951
>KH2012:KH.L50.6.v1.A.SL1-1
GTTTTAACTGCGTTAAAAAAAAACTGAAACCGATAGATTGTGTTGCAAGGTGATAAAACG
TGGTTGGGGTCAAAAAGTATCTTTTCACTCCGACAGTGGAATTCGTGCACAAAAGCAAAG
ATTCAAAGCGACATTTGAAGTGTGTGGGTCCATTTGCAACCATTTGAAACACAACGATGA
GCATCAAGCTTATATTACTTCTCTGCAGCGTTGCGATCGGCTTGGCCGTGGGAAAACCTA
CCGACACAACGACCTGCCCATCCAGATGTAACTTATCACACGGATTCTGCAACCCTAGAC
AACAATGCACGTGTTTCCCCGGTTGGGAAGGTCCCGAGTGCAACCAATGCTCGACGTTGA
TTGGTTGTTTACATGGGTCATGTGACCGTCCTGGACAATGCAATTGTGACGTAGGATGGG
GAGGACGAAAGTGCGATCGCGATTTACAATACTGCGAGCGACATCGGCCGTGCAGGAACG
GAGCAACATGTATCAACAATTTGCTCGGTGGATTTAAATGTATTTGCCCGACCGGTTTAA
CAGGCACAACTTGCCAGGAGACCGCCACCACAACCCCCCCTATAACCCCAAGATCCGGGG
GTAAACCACGGTGCTCCAATGGAGGAACTTGCATTCGTGGAAACGCCGAACTTGGATGCG
AATCGTGTCGATGTCCGACCGGATTCACTGGACAGCTATGCGAACAAATCGTGCGTATGT
GCGTTATGCGTCCATGCGCTAACGGCGGGAAATGTCAAGACGTTATTGGCAACTTCAGAT
GCGATTGTGCGCATGGGTACAGAGGACGTTACTGCACTGAAGACATCAATGAATGTACTG
TACTTGGTCGGCATGCTTGTGAGAATGGTGGAACCTGCGTCAATAGGTTCGGTGGTTACA
CTTGCGCTTGCTCGGATGGTTACTACGGGTCGCGCTGTCAATCAAAAATTATCCAAATCC
AAGCCAGAGTAACTACAACAGTAAAACCAACAACAACAACAACGACAACAACAACAACTG
AAGCTACAACAACAAAATCAACAACGGAAACACTGAAGGAAATTGTTGTTGTTCCAAATT
TGAAGAAACCATTCAGGAAAAACATCAAGGTCACTCACATCGTTCGCCAGGTGGAGGTAG
AGACATCAAACGGGGATATGACGTTTATCCGTGACGTAGTCGACCACCAAGGACCAAACA
GCGCTGAGAACGAAGCTCAATCGTCAGTGACCACAGTACAGGCACTCACTTTTGCTTTCC
TGGGGGTAGCGATCGCTTTATTTATCGGCATCGTTATATTCATGTGGATTCATTGCTCAA
AGAAAGGCCGCAACTTACGTCAGCGGTGTACCGGGGAGTCACCGACCGAAGAAACCCCCA
TGAACGAGAACAGCCGAGAGCCTTCAATAGTGAAAACCCGTCATGCAAGCTACAGCCCAC
CACAATATGTGTTAGAAGAATGCCAACCAAAACCAGGATACCCGATGCGCTCTGTAGCGC
TACCTAGCGACGATAGGGAGCCAATCGACTGTTTATACGTCGCCCTCCCAAACAATTCGA
CGCCCGATGTTGCATCGATGGCGAATCGTGTTTTAAACTCTCCCTCTCTCCCCGCTTACG
ATGAACGTTACTAGTTCACCGCGAACTTTTCGTTTTTATTTCTTTCTTTTATTTTTTTTC
TTGCACTGCGACTGTGATATTCGTTTTCTACCCACGTAACAAGCACGTGATTCGTTGTTA
AGCGTCCATGGCAACCGTATATCGCCATGACAACCGACGGAAGCGAAGAAACTTTTCAAA
CTGCGTTGCTTCACATTTCTTTTTATTTCGTTCATTATTTTATCACTGTGTCTTCTGCTA
TGTGACGTCACGACCCACGTGACTTCAGCCCACCAATCATTACCGTTGTAAGTTCTTTTA
CCGTCGATCAAATAAACGTACTCTCTGCCGA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[26-59] 9.604 - T[92-130] 20.301 - T[138-179] 10.46 - T[181-217] 18.262 - T[219-258] 21.25 |
| SMART |
EGF-like_dom (IPR000742) - T[29-59] 160.0 - T[60-90] 15.0 - T[95-130] 1.1E-5 - T[141-179] 39.0 - T[184-217] 6.9E-5 - T[222-258] 3.8E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[47-58] . - T[118-129] . - T[167-178] . - T[167-178] . - T[205-216] . - T[205-216] . - T[246-257] . - T[246-257] . |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[92-130] 2.3E-8 - T[185-217] 5.7E-4 - T[219-258] 8.1E-12 |
| Pfam |
EGF-like_dom (IPR000742) - T[96-127] 3.3E-6 - T[185-215] 1.4E-6 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[196-207] . - T[237-248] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[219-246] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[219-253] 2.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DLK2_HUMAN | 34.036 % | 181 | 2.01E-52 |
| DLL1_HUMAN | 35.714 % | 172 | 8.56E-47 |
| DLK1_HUMAN | 38.645 % | 161 | 5.68E-45 |