- Transcript 'KH2012:KH.C8.209.v2....' >
- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'KH2012:KH.L4.55.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.55.v1.A.nonSL34-1
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
KhL4 [77,116 / 78,706]
Amino acid sequence
Length: 381
>KH.L4.55.v1.A.nonSL34-1
ESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMTNDGNAILREITVQHPA
AKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQNMHPTVIIGAYRKALDDMQEI
LGEMSVEVDVNKKSEMRKIVKSAIGTKFINKRLRKSDNNRIARACGATVCSRTEEIREED
IGTEAGLFEVRKFGEEYFTFITKCKNPKACTILLRGASKDVLMEVERNLQDAMQVTRNVM
INPQLLPGGGAVEMAVAQKMKALSKSMMGVEQWPYRAVADALEIIPRTLIQNCGASTIRT
ITALRAKHADAGNETWGVNGESGQIADMNVLDVWEPLSVKLQTYKTAMETAMLLLRIDDI
VSGTKKAEGGEGTGTAAPTGA
Nucleotide sequence
Length: 1,146
>KH2012:KH.L4.55.v1.A.nonSL34-1
GAATCGGGACGCAAGGTCCAACTAGGTAATGTCGCAGCCGCTAAAACGATAGCTGACGTT
ATAAGAACATGTTTGGGTCCAAGGTCTATGCTGAAAATGCTAATGGACCCAATGGGTGGG
ATCGTGATGACAAATGATGGGAACGCCATCCTCCGTGAGATCACAGTCCAACATCCAGCA
GCCAAGTCCATGATAGAGATCAGCAGGACACAAGATGAGGAGGTGGGAGACGGGACAACC
TCAGTGATCATCTTAGCAGGGGAGATGATGACAGCAGCTGAGCAGTTCCTGGAGCAGAAT
ATGCATCCAACAGTGATCATTGGTGCTTACCGGAAAGCTCTGGATGACATGCAAGAGATC
TTAGGAGAAATGAGCGTGGAAGTGGATGTGAACAAGAAGTCCGAGATGAGGAAGATAGTG
AAGAGCGCGATCGGGACGAAGTTCATCAATAAGAGACTTCGGAAGTCTGATAATAATCGT
ATCGCTCGTGCCTGTGGCGCCACCGTGTGCTCAAGAACAGAGGAGATAAGAGAAGAGGAC
ATAGGAACTGAGGCCGGGCTGTTTGAGGTCCGGAAGTTTGGTGAAGAGTATTTCACCTTC
ATCACTAAATGCAAGAACCCGAAGGCGTGCACCATCTTGCTTCGTGGAGCGAGTAAAGAT
GTGTTAATGGAGGTTGAGAGGAATCTTCAGGATGCGATGCAGGTGACGAGGAACGTGATG
ATCAACCCACAACTTCTACCAGGTGGTGGCGCTGTGGAGATGGCAGTTGCTCAAAAGATG
AAGGCGCTGTCGAAATCCATGATGGGGGTGGAGCAGTGGCCGTACCGAGCTGTCGCTGAT
GCATTGGAGATTATACCGCGTACCTTGATACAGAATTGTGGTGCAAGCACAATACGTACG
ATCACCGCACTCCGTGCTAAACATGCAGATGCTGGGAATGAAACATGGGGAGTGAACGGA
GAATCTGGGCAGATCGCGGATATGAACGTGCTCGATGTATGGGAACCTTTGTCTGTTAAA
CTTCAAACGTACAAGACAGCTATGGAGACCGCCATGCTATTGCTTAGAATTGATGATATT
GTTTCTGGAACTAAAAAGGCAGAAGGAGGGGAGGGAACTGGAACAGCCGCGCCCACTGGA
GCATGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-151] 1.4E-195 - T[151-371] 1.4E-195 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[2-128] 5.76E-84 - T[243-363] 5.76E-84 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[10-128] 1.4E-55 - T[244-361] 6.5E-77 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[17-151] 3.6E-49 - T[150-362] 3.8E-67 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[19-35] 1.2E-15 - T[41-59] 1.2E-15 - T[71-90] 1.2E-15 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[22-34] . - T[43-59] . - T[71-79] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[129-150] 1.4E-55 - T[209-243] 6.5E-77 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[149-216] 5.96E-16 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[151-208] 6.5E-77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 32.766 % | 132 | 4.05E-34 |
| TCPG_HUMAN | 70.614 % | 348 | 2.76E-116 |
| TCPD_HUMAN | 39.456 % | 130 | 1.81E-33 |