- Transcript 'KH2012:KH.L4.29.v2.C...'
Transcript Model
Transcript Id
KH2012:KH.L4.29.v2.C.SL4-1
Possible name(s)
DLL1; SNED1
Gene model
Location
KhL4 [145,416 / 158,783]
Amino acid sequence
Length: 713
>KH.L4.29.v2.C.SL4-1
FSLEYDVNCRYDYIQYVFDATNNRDLSKSKRFCGNGLDKINGGRLRGPGPLIMVFVSDDS
AAESGFKFSFEFELTGPDPCESNPCQHDGECESHPDYYTCKCSDGFAGINCEIDMDECAS
YPCKHGGTCVDGVRDYTCDCLEGFTGKDCETPPDFCASNPCENGGLCVNRNVDFVCSCPR
DFMGEKCEEPAPEVTTQPPSPAPKEDEKAAPADHEPHPPGDANNHRTSVIIAVILVLLVL
FLLLGIFLWYWFKLRKGNPQKREKEVTLINMKTKSEHGQGRSGHRLSRTTSINSVTMKGD
SRDGRLLNKLKKMSEDIIMEEVPDETNRPPHHIHPSNPYIAPVSSIPNTIPDTSNLRKIS
IPVSQHELHGLGNHRMGPFQPTNIAPHDAIGLLNQLKQNNNNNMDFKSALSQYGIPTYTP
KPFPSYNMAPLAVANVANPQINPFQPEPSYPVDPSYPTDPSYPTQPDHSMELSAQEAAEV
VNHLLRSEPNNGKPVTSQEAMEIIRHVRDKSYGEERPPMDREKSIVLHPHEVANIFNKFR
NRPTVTESDEPIRNEGGIASSYDPSDPGDRAPNRINREFRECSPIQEESSGGKHGNPRVA
WTPEADHEEPVVKRVRKKPKRFLCESSIDPDQKVHDWLESTPKVKGNKHKKHRSPVNSVA
TDTVITRTLPTKVDRNNRHSPSNEEPPRAPRTIRQTRRMIPDKSMLPITGFLQ
Nucleotide sequence
Length: 2,708
>KH2012:KH.L4.29.v2.C.SL4-1
ATTCTCATTAGAGTATGACGTAAATTGTCGATATGATTATATCCAATACGTGTTCGACGC
AACAAACAATAGAGATTTAAGTAAATCTAAAAGGTTCTGTGGGAATGGTTTGGACAAAAT
CAACGGAGGTCGACTCAGAGGACCTGGTCCCCTTATCATGGTGTTCGTAAGCGATGACTC
AGCTGCTGAGTCAGGGTTCAAATTCTCGTTCGAATTTGAGTTGACAGGACCTGACCCTTG
TGAGTCCAACCCATGTCAACACGACGGCGAATGTGAATCTCATCCTGATTATTACACGTG
CAAATGTTCTGATGGGTTTGCTGGGATTAATTGTGAAATAGATATGGATGAATGTGCATC
CTACCCATGCAAACACGGGGGAACTTGTGTGGACGGGGTGCGGGATTATACATGCGATTG
TTTGGAGGGGTTCACAGGGAAGGATTGTGAAACACCTCCAGATTTCTGTGCGTCCAATCC
TTGTGAAAACGGAGGACTTTGCGTGAATCGCAATGTCGATTTTGTGTGTTCGTGTCCGAG
GGACTTCATGGGGGAGAAATGTGAAGAGCCAGCACCAGAAGTTACAACCCAGCCCCCCTC
GCCCGCACCAAAGGAAGATGAAAAAGCAGCACCAGCCGACCATGAACCTCATCCACCTGG
AGATGCAAACAACCATAGGACCTCTGTGATCATCGCTGTGATCCTCGTGCTCCTCGTCCT
CTTCCTCTTGCTCGGGATCTTTCTGTGGTATTGGTTCAAACTAAGGAAGGGAAACCCCCA
GAAGAGAGAAAAGGAAGTGACACTCATTAATATGAAAACTAAGTCCGAACATGGGCAAGG
TCGTTCCGGTCATCGATTATCGCGCACGACCTCGATCAACAGCGTTACTATGAAAGGGGA
TTCCCGGGATGGAAGATTGTTGAACAAACTGAAGAAAATGTCCGAGGATATTATTATGGA
AGAAGTGCCTGATGAAACGAACCGTCCTCCCCACCACATTCACCCCAGCAACCCTTACAT
TGCCCCGGTGTCATCAATACCAAACACCATACCTGATACTTCAAATTTAAGGAAAATATC
GATCCCAGTTTCGCAGCATGAACTCCATGGACTTGGTAACCATCGCATGGGTCCCTTCCA
ACCGACCAACATTGCCCCGCACGATGCGATCGGGCTGCTTAATCAACTCAAGCAAAATAA
CAACAATAATATGGATTTCAAATCAGCTTTGTCACAATATGGGATTCCCACGTACACCCC
CAAACCCTTCCCCTCATACAACATGGCCCCGTTAGCCGTAGCAAACGTAGCTAACCCCCA
AATCAACCCCTTCCAACCTGAACCATCTTACCCCGTCGACCCATCTTACCCCACTGACCC
ATCTTACCCCACCCAACCTGACCACTCGATGGAGTTAAGTGCGCAGGAAGCTGCAGAAGT
CGTCAATCATTTGTTACGAAGCGAGCCGAACAATGGGAAGCCTGTGACATCACAAGAGGC
GATGGAGATAATTCGTCACGTTCGCGACAAATCTTACGGGGAAGAGCGCCCCCCAATGGA
TCGAGAGAAGAGCATCGTTCTTCATCCACATGAGGTCGCTAACATTTTCAATAAGTTCCG
TAATCGTCCAACCGTGACCGAATCTGACGAACCAATCAGAAACGAGGGAGGAATCGCAAG
TTCTTACGATCCATCAGACCCAGGGGACCGAGCCCCGAACCGAATCAACCGAGAGTTCCG
TGAATGCTCCCCAATACAAGAGGAATCGAGCGGGGGTAAACATGGAAACCCACGCGTTGC
ATGGACGCCAGAAGCCGACCATGAGGAACCAGTTGTTAAACGAGTTCGTAAAAAGCCGAA
GCGATTTTTGTGCGAGAGTTCAATTGACCCCGACCAGAAAGTCCATGATTGGCTGGAAAG
CACACCGAAGGTTAAGGGCAACAAACACAAGAAACACCGTTCACCGGTCAACTCGGTTGC
CACAGATACCGTGATCACACGAACGTTGCCGACCAAAGTGGATCGGAATAATAGGCATTC
CCCAAGCAATGAGGAACCCCCAAGAGCCCCACGCACAATACGACAAACAAGACGGATGAT
TCCCGACAAATCAATGCTTCCAATTACAGGTTTCCTACAATAGGAAAACAAAGCCAAGTC
ACTGGTTGAGAATTTGATCAAAGCTCCATTGCATAGCAGTCAGAATGTGGTGGGACCCGG
ATTGGGGGTTAACCGACAGAATGCATTCGTTGGCCCCAATAAAATTGAAGCTTTCTAACT
TCTAAGTGATTGAGACTTTCTGTGCCACTTCCATGCCCACAGTCAAGTTGCTGAAGCTAT
TGCAGTGTGTGGATAAGCAGACATAACTTTTGGTTGATTTGGTCATTTATATCCTCATGG
GTGGGAACTTGAGTGACTTATCCATGGTTGCCACTCCCATGCCCACAGTCGAGTTGCTGA
AGCTATTGCAGTGTGTGGATAAGCAGACATGACTTTTGGTTGGTTTGGTCATTTATATCC
TCGTGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTGCCATGCCCGCAGTCGAGT
TGCTAAAGCTATTGCAGTGTGTGGATAAGCAGACATAACTTTTGGTTGATTTGGTCATTT
ATATCCTCATGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTCCCATGCCCGCAG
TCGAGTTG
| ProSiteProfiles |
CUB_dom (IPR000859) - T[1-73] 10.906 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[1-75] 7.5E-6 |
| CDD |
CUB_dom (IPR000859) - T[1-72] 2.37689E-7 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[76-112] 19.501 - T[114-150] 24.057 - T[152-188] 18.884 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[78-112] 0.015 - T[114-150] 3.3E-11 - T[154-188] 0.0053 |
| SMART |
EGF-like_dom (IPR000742) - T[79-112] 7.8E-4 - T[117-150] 2.4E-8 - T[155-188] 3.8E-6 |
| Pfam |
EGF-like_dom (IPR000742) - T[80-110] 2.3E-6 - T[118-147] 1.7E-10 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[100-111] . - T[100-111] . - T[138-149] . - T[138-149] . - T[176-187] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[114-138] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[129-140] . - T[167-178] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRUM1_HUMAN | 41.667 % | 110 | 6.18E-25 |
| DLL1_HUMAN | 36.264 % | 122 | 8.31E-29 |
| SNED1_HUMAN | 45.528 % | 116 | 1.28E-26 |