- Transcript 'KH2012:KH.L4.29.v2.C...'
Transcript Model
Transcript Id
KH2012:KH.L4.29.v2.C.SL2-1
Possible name(s)
DLL1; SNED1
Gene model
Location
KhL4 [145,413 / 158,783]
Amino acid sequence
Length: 714
>KH.L4.29.v2.C.SL2-1
RFSLEYDVNCRYDYIQYVFDATNNRDLSKSKRFCGNGLDKINGGRLRGPGPLIMVFVSDD
SAAESGFKFSFEFELTGPDPCESNPCQHDGECESHPDYYTCKCSDGFAGINCEIDMDECA
SYPCKHGGTCVDGVRDYTCDCLEGFTGKDCETPPDFCASNPCENGGLCVNRNVDFVCSCP
RDFMGEKCEEPAPEVTTQPPSPAPKEDEKAAPADHEPHPPGDANNHRTSVIIAVILVLLV
LFLLLGIFLWYWFKLRKGNPQKREKEVTLINMKTKSEHGQGRSGHRLSRTTSINSVTMKG
DSRDGRLLNKLKKMSEDIIMEEVPDETNRPPHHIHPSNPYIAPVSSIPNTIPDTSNLRKI
SIPVSQHELHGLGNHRMGPFQPTNIAPHDAIGLLNQLKQNNNNNMDFKSALSQYGIPTYT
PKPFPSYNMAPLAVANVANPQINPFQPEPSYPVDPSYPTDPSYPTQPDHSMELSAQEAAE
VVNHLLRSEPNNGKPVTSQEAMEIIRHVRDKSYGEERPPMDREKSIVLHPHEVANIFNKF
RNRPTVTESDEPIRNEGGIASSYDPSDPGDRAPNRINREFRECSPIQEESSGGKHGNPRV
AWTPEADHEEPVVKRVRKKPKRFLCESSIDPDQKVHDWLESTPKVKGNKHKKHRSPVNSV
ATDTVITRTLPTKVDRNNRHSPSNEEPPRAPRTIRQTRRMIPDKSMLPITGFLQ
Nucleotide sequence
Length: 2,711
>KH2012:KH.L4.29.v2.C.SL2-1
CAGATTCTCATTAGAGTATGACGTAAATTGTCGATATGATTATATCCAATACGTGTTCGA
CGCAACAAACAATAGAGATTTAAGTAAATCTAAAAGGTTCTGTGGGAATGGTTTGGACAA
AATCAACGGAGGTCGACTCAGAGGACCTGGTCCCCTTATCATGGTGTTCGTAAGCGATGA
CTCAGCTGCTGAGTCAGGGTTCAAATTCTCGTTCGAATTTGAGTTGACAGGACCTGACCC
TTGTGAGTCCAACCCATGTCAACACGACGGCGAATGTGAATCTCATCCTGATTATTACAC
GTGCAAATGTTCTGATGGGTTTGCTGGGATTAATTGTGAAATAGATATGGATGAATGTGC
ATCCTACCCATGCAAACACGGGGGAACTTGTGTGGACGGGGTGCGGGATTATACATGCGA
TTGTTTGGAGGGGTTCACAGGGAAGGATTGTGAAACACCTCCAGATTTCTGTGCGTCCAA
TCCTTGTGAAAACGGAGGACTTTGCGTGAATCGCAATGTCGATTTTGTGTGTTCGTGTCC
GAGGGACTTCATGGGGGAGAAATGTGAAGAGCCAGCACCAGAAGTTACAACCCAGCCCCC
CTCGCCCGCACCAAAGGAAGATGAAAAAGCAGCACCAGCCGACCATGAACCTCATCCACC
TGGAGATGCAAACAACCATAGGACCTCTGTGATCATCGCTGTGATCCTCGTGCTCCTCGT
CCTCTTCCTCTTGCTCGGGATCTTTCTGTGGTATTGGTTCAAACTAAGGAAGGGAAACCC
CCAGAAGAGAGAAAAGGAAGTGACACTCATTAATATGAAAACTAAGTCCGAACATGGGCA
AGGTCGTTCCGGTCATCGATTATCGCGCACGACCTCGATCAACAGCGTTACTATGAAAGG
GGATTCCCGGGATGGAAGATTGTTGAACAAACTGAAGAAAATGTCCGAGGATATTATTAT
GGAAGAAGTGCCTGATGAAACGAACCGTCCTCCCCACCACATTCACCCCAGCAACCCTTA
CATTGCCCCGGTGTCATCAATACCAAACACCATACCTGATACTTCAAATTTAAGGAAAAT
ATCGATCCCAGTTTCGCAGCATGAACTCCATGGACTTGGTAACCATCGCATGGGTCCCTT
CCAACCGACCAACATTGCCCCGCACGATGCGATCGGGCTGCTTAATCAACTCAAGCAAAA
TAACAACAATAATATGGATTTCAAATCAGCTTTGTCACAATATGGGATTCCCACGTACAC
CCCCAAACCCTTCCCCTCATACAACATGGCCCCGTTAGCCGTAGCAAACGTAGCTAACCC
CCAAATCAACCCCTTCCAACCTGAACCATCTTACCCCGTCGACCCATCTTACCCCACTGA
CCCATCTTACCCCACCCAACCTGACCACTCGATGGAGTTAAGTGCGCAGGAAGCTGCAGA
AGTCGTCAATCATTTGTTACGAAGCGAGCCGAACAATGGGAAGCCTGTGACATCACAAGA
GGCGATGGAGATAATTCGTCACGTTCGCGACAAATCTTACGGGGAAGAGCGCCCCCCAAT
GGATCGAGAGAAGAGCATCGTTCTTCATCCACATGAGGTCGCTAACATTTTCAATAAGTT
CCGTAATCGTCCAACCGTGACCGAATCTGACGAACCAATCAGAAACGAGGGAGGAATCGC
AAGTTCTTACGATCCATCAGACCCAGGGGACCGAGCCCCGAACCGAATCAACCGAGAGTT
CCGTGAATGCTCCCCAATACAAGAGGAATCGAGCGGGGGTAAACATGGAAACCCACGCGT
TGCATGGACGCCAGAAGCCGACCATGAGGAACCAGTTGTTAAACGAGTTCGTAAAAAGCC
GAAGCGATTTTTGTGCGAGAGTTCAATTGACCCCGACCAGAAAGTCCATGATTGGCTGGA
AAGCACACCGAAGGTTAAGGGCAACAAACACAAGAAACACCGTTCACCGGTCAACTCGGT
TGCCACAGATACCGTGATCACACGAACGTTGCCGACCAAAGTGGATCGGAATAATAGGCA
TTCCCCAAGCAATGAGGAACCCCCAAGAGCCCCACGCACAATACGACAAACAAGACGGAT
GATTCCCGACAAATCAATGCTTCCAATTACAGGTTTCCTACAATAGGAAAACAAAGCCAA
GTCACTGGTTGAGAATTTGATCAAAGCTCCATTGCATAGCAGTCAGAATGTGGTGGGACC
CGGATTGGGGGTTAACCGACAGAATGCATTCGTTGGCCCCAATAAAATTGAAGCTTTCTA
ACTTCTAAGTGATTGAGACTTTCTGTGCCACTTCCATGCCCACAGTCAAGTTGCTGAAGC
TATTGCAGTGTGTGGATAAGCAGACATAACTTTTGGTTGATTTGGTCATTTATATCCTCA
TGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTCCCATGCCCACAGTCGAGTTGC
TGAAGCTATTGCAGTGTGTGGATAAGCAGACATGACTTTTGGTTGGTTTGGTCATTTATA
TCCTCGTGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTGCCATGCCCGCAGTCG
AGTTGCTAAAGCTATTGCAGTGTGTGGATAAGCAGACATAACTTTTGGTTGATTTGGTCA
TTTATATCCTCATGGGTGGGAACTTGAGTGACTTATCCATGGTTGCCACTCCCATGCCCG
CAGTCGAGTTG
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[1-76] 3.8E-6 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[1-74] 10.877 |
| CDD |
CUB_dom (IPR000859) - T[2-73] 2.38051E-7 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[77-113] 19.501 - T[115-151] 24.057 - T[153-189] 18.884 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[79-113] 0.015 - T[115-151] 3.3E-11 - T[155-189] 0.0053 |
| SMART |
EGF-like_dom (IPR000742) - T[80-113] 7.8E-4 - T[118-151] 2.4E-8 - T[156-189] 3.8E-6 |
| Pfam |
EGF-like_dom (IPR000742) - T[81-111] 2.3E-6 - T[119-148] 1.7E-10 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[101-112] . - T[101-112] . - T[139-150] . - T[139-150] . - T[177-188] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[115-139] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[130-141] . - T[168-179] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FAT1_HUMAN | 33.854 % | 111 | 5.07E-25 |
| DLL1_HUMAN | 36.264 % | 122 | 8.96E-29 |
| SNED1_HUMAN | 45.528 % | 116 | 1.26E-26 |