- Transcript 'KH2012:KH.C11.588.v1...' >
- Region 'REG00001297' >
- Transcript 'Mooccu.CG.ELv1_2.S52...' >
- Region 'REG00000200' >
- Transcript 'KH2012:KH.L4.26.v1.R...'
Transcript Model
Transcript Id
KH2012:KH.L4.26.v1.R.ND1-1
Possible name(s)
SLCO1B1; SLCO1B3; SLCO2A1
Gene model
Location
KhL4 [128,810 / 135,610]
Amino acid sequence
Length: 693
>KH.L4.26.v1.R.ND1-1
IVCCVIMNEPSHSHTAASPLLERPRYDRAYFQNGPGDAQRTVTLRTASMNEGMSRPRERT
ISAIAPMPTSCYTINMFLFFLTCFQLINLLTLTYTDSVLNYITKRFKIPNTMASFIPSSY
QVGNMVVIIPISYFGAKLNRPRAIGIGVMVMVVGLGFCMLPHFILPAPPLNNSTTSSLCW
ERPHIGKALVHRATDLTTPRNLPCNKHATVYNPALLLILGHLLIGGGAATLWPLGVSYID
DHVVIRKIPIYIGIFIGTTLMGPVFGFLLGSVSSAIYVTTNSSHLHQTNPAWIGAWWLGY
VVAAILLVLLLFPFYFYPRYLPVSPQKEAELAEIAALEDRRHMVGGVLLMVDMTCAIRRT
LSTPLVVTAILSYIAMANLLAGVSTFGSTYVQRMFNVLRMTSDMLIGGVCVPLGIAGTFA
GGYLMKKYNFDIRQTLLFTIIFSGAGCVFLAALFGLGCKVPSIAGITAPYRGSDNLNKTA
YCNYDCQCPKGQFLLVCGADKVTYISPCYAGCKHTNSTTGYRKISKYTNCSCVSGDDKSA
HSGSCSSTNCGGLLALFMICVGIGITLLCFCQAPVYVVLLRVLESGDKALGIGLMSFSSR
LLGYVPGPIWFGLILDRSCIYKAPACHGKALCYLYNTYGLRMSYIGLSLACSMVYMLVFI
VTFVWMEFNTGKYEKDPIMIEPLELDRELRREN
Nucleotide sequence
Length: 2,084
>KH2012:KH.L4.26.v1.R.ND1-1
AGATCGTTTGTTGCGTCATAATGAACGAACCTTCGCACAGCCACACTGCTGCGTCACCAT
TACTAGAACGGCCAAGATACGACCGTGCTTATTTCCAAAACGGGCCTGGCGATGCGCAAC
GCACAGTTACGCTACGTACAGCTTCAATGAACGAAGGCATGTCTCGGCCTCGTGAACGCA
CGATATCAGCCATAGCCCCGATGCCGACGTCTTGTTATACGATCAATATGTTTCTGTTCT
TTCTAACTTGCTTCCAACTTATTAACTTGCTGACACTGACTTACACGGACAGTGTGTTGA
ACTATATAACTAAAAGGTTCAAGATACCGAACACGATGGCCTCCTTCATACCAAGTAGTT
ACCAAGTTGGCAACATGGTCGTGATCATCCCTATCTCATATTTTGGTGCCAAATTAAACC
GACCACGAGCCATTGGTATTGGAGTAATGGTAATGGTGGTAGGGTTGGGGTTTTGTATGT
TACCTCACTTTATACTACCTGCCCCACCCTTGAATAACTCTACAACGTCAAGTCTATGCT
GGGAGAGGCCTCATATTGGAAAGGCATTGGTACACAGAGCTACAGACTTGACAACGCCAA
GGAATCTTCCGTGTAATAAACATGCGACTGTGTATAACCCTGCACTGCTGCTAATTCTAG
GTCATCTTTTAATTGGAGGGGGAGCAGCTACATTATGGCCACTAGGTGTTTCTTATATTG
ATGATCACGTTGTTATTAGGAAGATTCCGATCTATATAGGCATTTTCATCGGCACTACAT
TGATGGGTCCCGTGTTCGGATTCCTGCTCGGCAGCGTGAGTTCAGCGATCTATGTTACAA
CGAACTCGAGTCATCTACATCAAACCAACCCTGCATGGATTGGTGCTTGGTGGCTGGGTT
ACGTTGTAGCAGCGATACTCCTCGTCCTCCTTCTCTTCCCCTTCTACTTCTACCCGAGGT
ACTTACCTGTGTCACCACAGAAGGAAGCAGAACTTGCAGAGATCGCTGCACTTGAGGATA
GGAGGCACATGGTGGGTGGGGTGTTACTTATGGTGGATATGACATGTGCAATACGACGTA
CATTATCAACACCACTAGTAGTGACCGCCATCCTCTCCTACATTGCAATGGCCAACTTAT
TGGCCGGCGTTTCAACTTTCGGGTCAACATACGTACAAAGGATGTTTAATGTGTTGAGGA
TGACTTCGGATATGTTAATAGGTGGGGTTTGTGTTCCACTTGGAATAGCAGGAACCTTTG
CAGGGGGCTACCTTATGAAGAAATATAACTTCGACATCCGTCAAACTTTGCTCTTTACCA
TTATATTCTCGGGAGCAGGTTGTGTGTTTCTCGCAGCATTATTTGGGTTGGGATGCAAAG
TACCTTCTATTGCTGGTATAACTGCTCCATATAGAGGTTCAGACAACTTAAACAAGACAG
CTTATTGTAACTATGATTGTCAATGCCCTAAAGGTCAATTCCTGCTTGTATGTGGGGCCG
ATAAAGTGACTTATATATCTCCATGTTACGCCGGGTGCAAACATACCAATAGTACAACTG
GTTATAGGAAGATTTCGAAATACACAAACTGTTCATGCGTAAGCGGGGACGACAAATCTG
CGCATTCGGGATCATGTTCTTCCACCAACTGCGGCGGTCTCCTTGCTTTGTTTATGATAT
GCGTTGGGATCGGGATCACATTATTATGTTTCTGTCAAGCCCCAGTTTACGTGGTGTTGC
TTCGTGTGTTGGAATCTGGAGATAAAGCTCTGGGAATTGGGCTCATGTCGTTTTCATCAC
GTTTACTTGGTTACGTCCCTGGTCCAATTTGGTTTGGTCTCATACTTGATAGGAGTTGTA
TCTATAAAGCCCCAGCATGCCATGGGAAAGCATTATGTTACTTGTACAATACATACGGGT
TACGTATGAGTTACATAGGGCTGAGCTTGGCTTGTAGTATGGTGTATATGTTGGTGTTCA
TCGTCACTTTCGTGTGGATGGAATTCAATACGGGAAAATATGAAAAAGATCCAATAATGA
TCGAACCACTAGAGCTCGATAGAGAGCTGAGACGAGAAAATTAA
| PANTHER |
OATP (IPR004156) - T[41-641] 1.6E-257 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[55-165] 1.09E-24 - T[217-467] 1.09E-24 - T[556-665] 1.09E-24 |
| TIGRFAM |
OATP (IPR004156) - T[72-664] 5.7E-124 |
| Pfam |
OATP (IPR004156) - T[76-637] 1.8E-130 |
| ProSiteProfiles |
MFS_dom (IPR020846) - T[77-670] 9.612 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[476-531] 9.684 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[476-532] 5.24E-7 |
| Pfam |
Kazal_dom (IPR002350) - T[483-532] 4.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO1C1_HUMAN | 27.312 % | 272 | 2.26E-81 |
| SO1B1_HUMAN | 28.46 % | 268 | 5.48E-80 |
| SO2A1_HUMAN | 32.014 % | 305 | 1.59E-94 |