Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L4.23.v2.A.nonSL4-2

Possible name(s)

CAV1; CAV2; CAV3

Gene model

KH2012:KH.L4.23

Location

KhL4 [95,905 / 97,508]

Sequences

Amino acid sequence

Length: 239

>KH.L4.23.v2.A.nonSL4-2
TTTMAENGEQKGDFEAQHEAATPGKTESVGGNSAPGTPGSRRSGTNDATRRFDSDDDDVT
KPCDEVKVPIDESGMDNVELDSVKEVKLEQPKSKSKKQKKEKKEKKPDTTDYVNRDPRNL
QESVKVNFADIIAEPSGAHSFNTVWGTSYKVYSVTKYWVYRIMTLVFGVPCALIWGVYFA
CLAFLSIWWIMPCIRCLGIKINFIGKIWSLTVRTILDPVFESIGLLLSRIRIVMSLRRD

Nucleotide sequence

Length: 933

>KH2012:KH.L4.23.v2.A.nonSL4-2
AATCGAAGTCGAGTTTAGGTAAACAACAACTATGGCAGAAAACGGAGAACAGAAAGGTGA
TTTCGAAGCACAACACGAAGCTGCAACCCCGGGAAAAACTGAGTCCGTTGGCGGGAATTC
AGCACCCGGAACCCCGGGGTCGAGACGTTCTGGAACCAATGACGCGACGAGGCGTTTCGA
TTCTGACGATGATGACGTCACAAAGCCCTGTGATGAGGTAAAAGTGCCGATCGACGAAAG
CGGGATGGACAATGTGGAACTTGATTCGGTTAAAGAGGTAAAACTCGAACAACCAAAGTC
CAAGTCCAAGAAACAGAAAAAAGAGAAAAAGGAAAAGAAACCAGACACAACTGACTACGT
TAACAGGGACCCTAGGAACCTGCAGGAATCCGTAAAGGTTAACTTTGCTGACATCATAGC
CGAACCTTCGGGAGCACATAGCTTCAATACGGTATGGGGAACGAGTTACAAGGTGTACTC
GGTTACGAAATACTGGGTGTACCGGATAATGACCCTCGTATTCGGCGTGCCATGCGCATT
GATATGGGGCGTTTACTTTGCTTGCCTTGCTTTCTTAAGCATTTGGTGGATCATGCCGTG
TATTAGATGTCTCGGTATCAAGATCAACTTCATTGGAAAGATTTGGTCGCTTACAGTTCG
AACAATTCTCGATCCAGTTTTCGAATCGATCGGGCTTCTTTTGAGTCGAATCCGGATTGT
GATGTCACTGAGGAGAGACTAGCACATAGAAATCAGAGTTTGTGCTGGAGTTTGGGGACA
ACTTTGTGCGAAACTAACATATTTTTAAACGTTTACGAATGCCAATTATTTACGAAATTT
TAACACGTTTAGAATGCAACGTATTTAACATTTTACATCAAAAATCGCGTATTGAATTTT
TATTCATTGTAATACACAAACATAAGAACTGTA

InterProScan

PANTHER	Caveolin (IPR001612) - T[22-238] 4.8E-108
Pfam	Caveolin (IPR001612) - T[106-234] 9.2E-52

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CAV1_HUMAN	41.42 %	150	5.31E-46
CAV3_HUMAN	45.865 %	137	3.04E-41
CAV2_HUMAN	33.607 %	94	5.07E-24