- Transcript 'KH2012:KH.L18.139.v1...' >
- Transcript 'KH2012:KH.L4.17.v2.A...' >
- Transcript 'KH2012:KH.L4.17.v2.A...' >
- Transcript 'KH2012:KH.C1.650.v1....' >
- Transcript 'KH2012:KH.L4.17.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.L4.17.v3.A.nonSL3-1
Possible name(s)
SALL1; SALL3
Gene model
Location
KhL4 [179,574 / 192,979]
Amino acid sequence
Length: 877
>KH.L4.17.v3.A.nonSL3-1
VSFTFGPRFCDPSILYSTESTPNIGATSPNSMKEEERQTNGFPAPDSNHQPLYYEDVARS
SSSPPHHSPPHFQHPEETRSQIFSSHDDTYEEQPLCIQEDEDKPTDVAPGAFPVIQEEKD
EIKTFQSSSPNQSPPRIDPQPPREPFVIPASREEHEDRRSSSETRSSSESRSSELQVIKE
QVKMIQQQHTYQIQMIHYLHWQLNLLSQRQQQNGLPSNEAPTAPPVFNPITQLLGTNPGI
LPPDPARLAMAMSASTSPPFGPSDPQSSFRRASISPPAPEPPRPQQRPMEPQDPPRMEPN
NEAMLRALQQHRQQQQEQIKQTPNPFLFQQQPQSSLPEHVSAMLRNKNLLPKRPEQHPTF
QDRNQVSQSLERTQMIRNEPKHPGQIDNGEEWVKNQCRTCRRVLSCPSALKLHYRTHTGE
RPYQCDLCSRAFTTRGNLRTHYSSVHRRELPPASSSGGSSVSKRGGSAKSESHICPLCSS
IFNDQVGLAQHMQMHAIVNKQQQQNLLAMKQKMIMAPPLPQIEGEKVKTEAVVDLSASGR
RPPSNPPSPVRGYEGGVSERKYRTPDKPENGGFPAIVTEHRGQSGFDALDLSSVSPAPQK
EEFKEVFAENGNTERYQETAQRTEIASAREPDTQRPFFPCGICLRQLESEEDLKEHLMTH
DGGSSCDSPSSSIGSTSGIQEQRGENGEELRMAMKIHTRTHTGEKPFICNVCSRSFTTKG
NLKVHMGTHVWGAGGSRKGRRVSMDNPLMSTWMKNSTNVDAVMPNARPAQQDARANASTA
AASIYQQYAAIAQGIMARNPAEGIPPTHVLNQALAARYLQQPLPIGANQVTTEGSPEASL
SSDGEQEGETPNAISASTAAHEWLWKAYQQRSQGQVN
Nucleotide sequence
Length: 3,054
>KH2012:KH.L4.17.v3.A.nonSL3-1
ACACAGATTAGTTGGGCAGTAGTCGCAATAGTATATTAGTTTATTAAGTTTCCTTCACTT
TTGGACCAAGATTTTGTGACCCGAGTATTCTGTACAGTACAGAATCGACTCCAAACATCG
GTGCTACGTCACCCAACAGCATGAAGGAAGAGGAGCGTCAAACGAACGGTTTTCCGGCCC
CGGATTCGAACCACCAACCACTTTATTACGAAGATGTCGCCAGATCATCCTCTTCTCCTC
CTCATCACTCCCCTCCACATTTCCAACATCCGGAGGAAACAAGGAGCCAAATCTTCTCCT
CTCATGACGACACGTATGAGGAGCAACCTCTCTGCATCCAGGAAGACGAAGACAAACCCA
CGGATGTTGCTCCGGGAGCTTTCCCGGTCATCCAGGAGGAAAAAGATGAAATAAAGACTT
TCCAATCATCCTCCCCCAACCAAAGTCCACCCAGGATCGATCCACAACCTCCACGGGAGC
CATTTGTGATCCCAGCATCCAGAGAGGAGCATGAAGATCGAAGATCATCATCAGAAACTC
GATCATCTTCCGAGAGCAGATCTTCCGAGCTCCAGGTGATCAAGGAACAAGTTAAGATGA
TCCAGCAACAACACACATACCAGATCCAGATGATCCATTACTTGCATTGGCAACTTAACC
TTCTGTCCCAACGACAACAACAAAACGGGTTACCTAGCAACGAAGCCCCCACAGCGCCAC
CAGTGTTCAACCCAATCACCCAACTTTTGGGGACAAACCCAGGTATCTTACCTCCAGACC
CAGCGAGACTAGCAATGGCGATGTCAGCATCTACAAGCCCCCCATTCGGCCCCTCTGACC
CCCAATCATCATTCAGACGCGCCTCCATTTCACCCCCTGCTCCAGAGCCACCCCGGCCCC
AACAGAGACCCATGGAGCCCCAGGACCCCCCACGCATGGAACCCAACAACGAAGCGATGC
TACGCGCGCTGCAACAACATCGACAACAACAACAAGAACAAATAAAACAAACGCCAAACC
CGTTTTTATTCCAACAACAACCACAATCTTCGCTACCGGAGCATGTATCAGCGATGCTGA
GGAACAAAAACCTCCTCCCAAAGCGTCCTGAGCAACATCCAACCTTCCAGGATCGAAACC
AGGTCTCCCAGTCTTTAGAGAGGACGCAGATGATCCGAAACGAGCCGAAACATCCGGGTC
AAATCGACAACGGGGAGGAATGGGTAAAGAACCAATGTCGGACTTGTCGTCGTGTTCTAA
GTTGCCCAAGCGCACTCAAGCTACATTACAGAACCCATACAGGCGAACGTCCATACCAAT
GCGACTTATGTTCACGAGCCTTTACCACACGTGGCAACCTCCGCACGCATTACAGCAGCG
TCCACCGACGTGAGCTCCCTCCCGCTTCCTCATCAGGAGGCTCCTCCGTGAGCAAGAGAG
GAGGATCTGCTAAATCCGAGAGTCATATTTGTCCTCTTTGTAGCTCCATCTTCAACGATC
AAGTTGGACTCGCACAACACATGCAGATGCACGCGATAGTGAATAAACAGCAGCAACAGA
ATTTGTTGGCTATGAAGCAGAAGATGATAATGGCCCCACCATTGCCACAAATAGAGGGCG
AAAAAGTGAAAACCGAAGCAGTTGTCGATCTTTCGGCGTCTGGTCGTCGCCCCCCCAGCA
ACCCCCCCTCCCCAGTTAGGGGTTACGAAGGTGGGGTCAGTGAAAGGAAGTACCGGACCC
CGGATAAACCCGAGAACGGGGGGTTTCCCGCTATCGTTACCGAGCATAGGGGTCAGAGTG
GGTTCGACGCTTTGGATCTCAGCAGTGTTTCCCCGGCACCGCAGAAAGAGGAATTTAAAG
AAGTTTTTGCAGAAAACGGAAACACTGAAAGATACCAGGAGACGGCCCAGCGTACGGAAA
TAGCTTCAGCCCGCGAACCTGACACCCAGCGGCCGTTCTTTCCATGCGGGATTTGCCTCC
GACAACTTGAGAGTGAGGAAGATCTGAAGGAACATCTGATGACGCATGATGGGGGGTCGT
CATGTGACAGTCCGTCATCGTCTATTGGGTCAACATCCGGCATCCAAGAGCAAAGAGGAG
AGAACGGAGAGGAGCTCAGAATGGCTATGAAGATCCACACACGAACGCACACCGGTGAAA
AACCTTTCATTTGCAACGTGTGCAGTCGATCGTTCACCACCAAGGGCAACTTGAAGGTAC
ATATGGGAACCCACGTGTGGGGGGCTGGGGGCTCCAGGAAAGGACGACGTGTGTCCATGG
ATAATCCTCTTATGTCAACATGGATGAAAAACTCAACGAACGTTGACGCAGTGATGCCGA
ATGCAAGGCCAGCACAACAGGACGCGAGGGCTAATGCATCGACAGCGGCAGCTTCAATTT
ACCAGCAATACGCCGCCATCGCCCAAGGTATTATGGCTCGCAACCCAGCTGAGGGGATTC
CCCCAACCCATGTATTGAACCAAGCATTGGCAGCAAGATACCTTCAACAACCCCTTCCTA
TCGGTGCCAACCAAGTGACAACTGAAGGTTCACCTGAAGCGAGTCTTTCATCCGACGGCG
AGCAAGAAGGGGAAACCCCTAACGCGATATCCGCATCAACTGCTGCTCACGAATGGTTGT
GGAAAGCTTACCAACAACGATCGCAAGGCCAGGTAAATTGAAGAACAAACGAAATTCTTT
TAATTTTCGAACTTCCTGTGACGACATAAATGAACTCCTGACGTCACAATCATTGCTGAA
AATCCCCACAAACGTCTTTACTACGTCACAAACAATATTGTGATGCTTCCGATTACGAAC
ATTCTGTATGACGTCAAAATGACGTAACAATGAACTATGTTGTAAATATTGTGTGTGTGT
TCTAACGTTGCTAAATCTTTGGTGCTTTCCCTGAAATGAAACCACGCAGTCAACCAGCTG
CTCCGTACAATAGGCTGCTGCTTATTTTAAAAACTCGACTTTTTGGTGCTAACTGTTTTG
TGTTCGTTTGAAAATAAATCGTTTTGAAACAAATAATTAAATTGCTTGTTGTTT
| SMART |
Znf_C2H2_type (IPR013087) - T[395-417] 4.5 - T[423-446] 3.4E-4 - T[473-495] 0.0031 - T[638-660] 0.18 - T[707-729] 1.7E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[395-422] 12.986 - T[423-451] 13.339 - T[473-496] 8.6 - T[638-665] 9.224 - T[707-729] 10.845 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[397-417] . - T[425-446] . - T[475-495] . - T[640-660] . - T[709-729] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[406-451] 3.8E-13 - T[472-495] 3.91E-5 - T[633-660] 3.91E-5 - T[694-729] 7.03E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SALL1_HUMAN | 41.83 % | 112 | 4.19E-25 |
| SALL3_HUMAN | 41.912 % | 108 | 4.52E-24 |
| SALL4_HUMAN | 48.515 % | 105 | 5.58E-23 |