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TRANSCRIPT CARD

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  1. Clone 'cima876401' > 
  2. Clone 'AHC0AAA190YM10' > 
  3. Transcript 'Moocul.CG.ELv1_2.S75...' > 
  4. Transcript 'KH2012:KH.L34.6.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.L34.6.v1.C.nonSL8-1

Possible name(s)

C8B; LRP6

Gene model

KH2012:KH.L34.6

Location

KhL34 [93,654 / 94,917]

Sequences

Amino acid sequence

Length: 202

>KH.L34.6.v1.C.nonSL8-1
ISCVMEEMTVRIYQMKTSSTVETACDGFTCVDSGRCISHRDVCDRYSDCSDSSDEKDCFK
VTTTTAHATTTTTVQPPTTMASINIPRKCKKNPSKSKCRLFWEILATKLTKRFIRKCVKK
PKSKKCKKWRPVLEIKQLASPYDFVPPKCKKNPGLGKCQSFLVHIAKQLPNKFVAKCNAK
PNKPKCRKFRVVLNLVPTFVEN

Nucleotide sequence

Length: 888

>KH2012:KH.L34.6.v1.C.nonSL8-1
TTCAGTTGGATAGCTGTGCTTGGGTTGAATTTAAGATTTAAGTTGTATTTAGGTTGCCAC
GTTTAATTTATTTTGGTCGCCACATTTATTTTGGTCGTCACAGAATGAATATGGAATTGC
TTGTGTTGGGATTAATATTATCATTTGTTGCTGGTCAACCGTCCGAAGGCACGGAACCTA
ACACTTGGCCATGTTCGGATGGAGTGAACTCTATCAATATAGATTTCTTGTGTGATGGAA
GAAATGACTGTCCGGATTTATCAGATGAAGACGAGTTCAACTGTGGAAACCGCATGTGAT
GGGTTTACATGTGTCGACTCTGGGCGTTGTATAAGCCATCGAGATGTGTGTGATCGGTAT
AGCGACTGTAGTGACAGTTCCGACGAGAAAGATTGTTTTAAAGTGACAACCACCACAGCC
CACGCTACAACTACAACAACGGTTCAACCCCCAACCACCATGGCGAGCATTAACATTCCG
CGAAAGTGCAAGAAAAATCCGAGCAAATCGAAGTGTCGTTTATTTTGGGAAATTCTTGCA
ACAAAACTCACAAAAAGATTCATACGAAAGTGCGTCAAGAAACCAAAGTCGAAAAAGTGC
AAAAAATGGCGGCCGGTACTTGAAATAAAGCAGCTTGCATCACCTTACGACTTCGTACCA
CCAAAGTGCAAGAAGAATCCAGGTTTAGGCAAGTGTCAATCATTCCTCGTTCACATTGCG
AAACAACTTCCAAATAAGTTTGTCGCCAAATGTAATGCCAAGCCCAACAAACCAAAATGC
AGGAAGTTCCGTGTCGTATTAAACCTTGTTCCAACATTTGTTGAAAACTAGTGGTCAAGC
ATAACATTAATTGGTTTTGGTTTATATTGTAACCGACCTTTTCATCTT

InterProScan

SUPERFAMILY
LDL_receptor-like_sf (IPR036055) - T[23-59] 4.71E-8
SMART
LDrepeatLR_classA_rpt (IPR002172) - T[24-60] 5.1E-7
ProSiteProfiles
LDrepeatLR_classA_rpt (IPR002172) - T[24-59] 11.55
Pfam
LDrepeatLR_classA_rpt (IPR002172) - T[26-58] 8.4E-6
CDD
LDrepeatLR_classA_rpt (IPR002172) - T[26-58] 1.0931E-7
ProSitePatterns
LDLR_class-A_CS (IPR023415) - T[36-58] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value