- Transcript 'KH2012:KH.C14.16.v1....' >
- Transcript 'Boleac.CG.SB_v3.S526...' >
- Transcript 'KH2012:KH.L34.6.v1.C...'
Transcript Model
Transcript Id
KH2012:KH.L34.6.v1.C.nonSL22-1
Possible name(s)
C8B; LRP6
Gene model
Location
KhL34 [93,655 / 94,917]
Amino acid sequence
Length: 202
>KH.L34.6.v1.C.nonSL22-1
ISCVMEEMTVRIYQMKTSSTVETACDGFTCVDSGRCISHRDVCDRYSDCSDSSDEKDCFK
VTTTTAHATTTTTVQPPTTMASINIPRKCKKNPSKSKCRLFWEILATKLTKRFIRKCVKK
PKSKKCKKWRPVLEIKQLASPYDFVPPKCKKNPGLGKCQSFLVHIAKQLPNKFVAKCNAK
PNKPKCRKFRVVLNLVPTFVEN
Nucleotide sequence
Length: 887
>KH2012:KH.L34.6.v1.C.nonSL22-1
TCAGTTGGATAGCTGTGCTTGGGTTGAATTTAAGATTTAAGTTGTATTTAGGTTGCCACG
TTTAATTTATTTTGGTCGCCACATTTATTTTGGTCGTCACAGAATGAATATGGAATTGCT
TGTGTTGGGATTAATATTATCATTTGTTGCTGGTCAACCGTCCGAAGGCACGGAACCTAA
CACTTGGCCATGTTCGGATGGAGTGAACTCTATCAATATAGATTTCTTGTGTGATGGAAG
AAATGACTGTCCGGATTTATCAGATGAAGACGAGTTCAACTGTGGAAACCGCATGTGATG
GGTTTACATGTGTCGACTCTGGGCGTTGTATAAGCCATCGAGATGTGTGTGATCGGTATA
GCGACTGTAGTGACAGTTCCGACGAGAAAGATTGTTTTAAAGTGACAACCACCACAGCCC
ACGCTACAACTACAACAACGGTTCAACCCCCAACCACCATGGCGAGCATTAACATTCCGC
GAAAGTGCAAGAAAAATCCGAGCAAATCGAAGTGTCGTTTATTTTGGGAAATTCTTGCAA
CAAAACTCACAAAAAGATTCATACGAAAGTGCGTCAAGAAACCAAAGTCGAAAAAGTGCA
AAAAATGGCGGCCGGTACTTGAAATAAAGCAGCTTGCATCACCTTACGACTTCGTACCAC
CAAAGTGCAAGAAGAATCCAGGTTTAGGCAAGTGTCAATCATTCCTCGTTCACATTGCGA
AACAACTTCCAAATAAGTTTGTCGCCAAATGTAATGCCAAGCCCAACAAACCAAAATGCA
GGAAGTTCCGTGTCGTATTAAACCTTGTTCCAACATTTGTTGAAAACTAGTGGTCAAGCA
TAACATTAATTGGTTTTGGTTTATATTGTAACCGACCTTTTCATCTT
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[23-59] 4.71E-8 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[24-60] 5.1E-7 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[24-59] 11.55 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[26-58] 8.4E-6 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[26-58] 1.0931E-7 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[36-58] . |
| Protein Name | Identity | Bit Score | e-value |
|---|