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TRANSCRIPT CARD

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  1. Clone 'cilv035l08'
  2. Clone 'cima879779'
  3. Transcript 'KH2012:KH.L22.58.v1....'

Transcript Model

Transcript Id

KH2012:KH.L22.58.v1.A.nonSL1-1

Possible name(s)

RPL11

Location

KhL22 [445,444 / 448,422]

Sequences

Amino acid sequence

Length: 184

>KH.L22.58.v1.A.nonSL1-1
LFTAATMAEDSAKKPNCMRDIHIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKAR
YTVRSFGIRRNEKIACHCTVRGPKAEEILERGLKVREYELRQGNFSKTGNFGFGIQEHID
LGIKYDPSIGIYGMDFYVMLARPGYNVRYRRKKKNRVGFPHRLTKPDGMRWFQQKYDGIL
LPGK

Nucleotide sequence

Length: 1,271

>KH2012:KH.L22.58.v1.A.nonSL1-1
CTTTTTACAGCAGCAACGATGGCAGAGGACAGCGCCAAGAAGCCGAACTGCATGCGAGAC
ATTCATATTCAGAAATTATGTCTGAATATCTGTGTTGGTGAATCTGGAGACAGGCTTACA
AGAGCTGCAAAGGTCTTGGAACAACTCACTGGACAAACACCTGTATTTTCAAAGGCTCGC
TATACTGTGCGTTCATTTGGCATTCGAAGAAATGAGAAAATTGCCTGTCACTGCACTGTC
CGTGGACCAAAAGCTGAAGAAATCCTTGAAAGAGGGTTGAAGGTTCGTGAATACGAACTT
AGGCAAGGCAACTTCTCCAAAACTGGTAATTTTGGATTTGGAATCCAGGAACACATTGAT
TTGGGAATTAAGTATGATCCATCCATTGGAATCTATGGAATGGATTTCTATGTTATGTTG
GCTCGACCAGGATACAATGTTCGATACCGCCGAAAAAAGAAGAACCGTGTTGGCTTCCCA
CACAGGCTAACCAAGCCTGATGGCATGAGATGGTTCCAACAAAAATACGATGGAATTCTC
TTACCTGGAAAGTAAGATCACATAATAAAGAAAGTGGATTCCGCTTGCTGTGTATTGTTT
TTAAAAGCAGTCTTCTAGTTAAAATGGCTCTTATTTGAATGAAGTATTTAATGAGTTAGA
TCAGTCAACGCTAGGTTTGTAACTTCTGTGACTGCTTAGTTTTGATCAATAATTGCTGTT
ATGACACGATTGCCGAATTATTAAAAACCATTCGTTATTCTTCAAAAACATGGAGTATTT
GCTGTAAATGTAAAACGGATGAAAAGGCTCTTTAATGACTACAACGCCAAATCTTGCACC
AGCCCGTTGATAAACAGGAATCTCAGTCATACGCACCCGCAAATTCGTTTTCTCGTATCC
GACGGTTAAATGTTTTTCTTGTCTGCTAATCGCCGTTAATTAAAAGTATGAACATAAATG
AAAGGTGACGAAAACCACGAAATAATGTAATCGCATAAATGTAAGCCGCGTCCAAACATG
TAACTGAGGTACAAAAGCACTTTTTATGAGGTAATTAGCCTATAATATTTCTGCTGTATA
TAACTATAGGAATCTTCCCACGTTTGATTGTTCTTTAGCAAAAAAATAATCGTGACTTAT
TCGCCTGGTGTACAAAAATCTATTCCTTGTTTGTTCGTTAGGTGGCAGCACAAGGTCGCA
TAAATTATTAACGCAAATGACGTTGACGTGTTTCGTGGCATCCAATTATCCATATAAAAT
AGACTGGATTT

InterProScan

PIRSF
Ribosomal_L5 (IPR002132) - T[3-178] 1.2E-40
Gene3D
Ribosomal_L5_dom_sf (IPR022803) - T[7-184] 7.7E-86
PANTHER
Ribosomal_L5 (IPR002132) - T[13-184] 2.0E-95
SUPERFAMILY
Ribosomal_L5_dom_sf (IPR022803) - T[16-179] 4.94E-58
Pfam
Ribosomal_L5_N (IPR031310) - T[16-69] 2.0E-20
ProSitePatterns
Ribosomal_L5_CS (IPR020929) - T[46-62] .
Pfam
Ribosomal_L5_C (IPR031309) - T[73-169] 3.9E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL11_HUMAN 77.528 % 295 5.63E-104