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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.45.v1.A...'
  2. Transcript 'KH2012:KH.L50.6.v1.A...'
  3. Region 'REG00001024'
  4. Clone 'ma110e12'
  5. Transcript 'KH2012:KH.L22.40.v1....'

Transcript Model

Transcript Id

KH2012:KH.L22.40.v1.A.ND1-1

Possible name(s)

ACVR1B; ACVR1C; TGFBR1

Location

KhL22 [96,803 / 103,061]

Sequences

Amino acid sequence

Length: 497

>KH.L22.40.v1.A.ND1-1
KKTQFYIICCISALTCYCGGSRENPYCERNVFNCTVPEGVCYAMTEVLPISKNILTQRGC
FRKNRLVPYNRPFVCEPVNKSNHQVICCKTDFCNHPEAMEAPTLPTTTASIQTNQDQLST
TLIVLLSVGGFLLMAMLVLVAVFYKKQHSKRNDPLVESQNSSLPDTNMQDLLDDKDFSTT
GSGSGLPLLVHRTIARQIQLQEVIGKGRYGEVFRGKWRGEDVAVKKFVTRDERSWAREAE
IYQTIMLRHENILGFIAADNKDVGTWTELWLISEYHENGSLFDYLGETRVDVGAMLKLCS
SIASGLAHLHNEIVGTLGKPPIAHCDLKSKNILVKKNGECAIADLGLAVRHDSSTDTIDI
PPNNRVGTKRYMAPEILDDTLNMLHFDSFKRADIYSLGLVLWEIGRRCSIGGQNLDYQLP
YYNMVPDDPTIEQMRVVVCEKMFRPQKEATWHKYDTMERMWKLMNECWYESGCARLTALR
VKKTIAKIEDEEGVKNI

Nucleotide sequence

Length: 2,188

>KH2012:KH.L22.40.v1.A.ND1-1
GCTCTTATACTGTTACTGCGGATTTTCTAAAAATTTTGTATAGCAAATAACTGAAAGAAG
ACACAGTTTTACATTATTTGTTGTATTTCAGCACTAACATGTTACTGTGGTGGCTCACGA
GAAAACCCATATTGTGAAAGAAATGTATTTAACTGCACTGTGCCAGAAGGTGTTTGTTAT
GCCATGACGGAAGTTCTACCTATTTCAAAAAATATTTTGACTCAAAGAGGATGTTTTAGA
AAAAACAGATTGGTGCCATACAACCGACCATTTGTATGTGAACCAGTCAATAAATCCAAC
CATCAAGTCATATGTTGCAAAACAGACTTCTGTAACCATCCTGAAGCAATGGAAGCACCA
ACATTGCCCACAACAACTGCCAGCATTCAAACTAATCAAGATCAACTGTCAACAACATTA
ATCGTTTTATTATCAGTTGGCGGGTTCTTGTTGATGGCAATGCTTGTTCTTGTTGCGGTT
TTCTATAAAAAGCAACACAGCAAGAGAAATGACCCATTGGTGGAAAGCCAGAATTCAAGC
CTACCAGACACTAACATGCAAGATCTCTTGGACGACAAGGACTTCTCTACTACTGGTTCA
GGTTCAGGATTGCCATTACTTGTCCATCGAACTATTGCTCGACAAATTCAACTACAAGAA
GTTATTGGAAAGGGAAGGTATGGTGAGGTGTTTCGTGGTAAATGGAGGGGTGAAGACGTC
GCGGTAAAGAAGTTTGTGACTCGCGATGAGAGATCCTGGGCAAGGGAGGCAGAGATTTAT
CAAACCATCATGTTACGACATGAGAATATACTCGGATTCATTGCTGCAGATAACAAAGAT
GTTGGGACATGGACTGAACTATGGTTGATATCGGAATACCACGAGAATGGATCTTTGTTC
GATTATCTTGGTGAAACACGTGTGGATGTTGGTGCCATGCTTAAGTTATGCAGCTCCATT
GCTAGTGGGTTGGCTCATTTGCATAATGAGATTGTTGGTACTTTAGGAAAACCCCCAATA
GCTCATTGTGATTTAAAGTCAAAGAATATTTTGGTGAAAAAAAATGGTGAATGTGCAATT
GCTGATCTTGGGTTGGCGGTCAGACATGATTCAAGCACCGACACTATTGACATTCCTCCT
AATAACAGGGTGGGAACCAAAAGATACATGGCACCTGAGATACTGGATGACACATTAAAC
ATGTTACATTTTGACTCTTTCAAACGTGCGGATATATATTCACTGGGACTTGTGCTGTGG
GAGATTGGTCGCAGATGTAGCATTGGAGGTCAGAATCTTGATTACCAACTTCCATATTAC
AACATGGTACCTGATGATCCAACAATTGAACAAATGAGAGTCGTTGTGTGTGAGAAGATG
TTTAGACCACAGAAGGAAGCAACATGGCATAAATATGATACCATGGAGCGAATGTGGAAA
CTGATGAATGAATGTTGGTACGAGAGCGGATGCGCACGTTTAACTGCACTGCGAGTAAAG
AAGACGATCGCGAAGATAGAAGATGAGGAAGGAGTGAAGAATATTTGATGTGTGGTGGTG
GTGGTTTCTTCATACAATGTAAATTACTTCCATCACTTATGTTAACCTCTACCCAACTTA
ACTCAAAACAAAAACAATTCAAAATCTTATCAGGATTTAGTTTTAGATCTTGTACACTGC
TTTTATGAAATATTTTTATTGTTCTGTTTGTACAAATATTTTAAACTTCTTTTTATTGAA
AAGTTCACAATGTTGCCAATGTATGTTGTGTTATGTGTTTGTTGTTTCTTGTTATGTATA
AGACTTTCACTTGGTAGTATCTAAAACCAGCAGGGTCTGTAGTCTGATCATAGTGTGCAC
TCTTAACAGGTGAACAACCAACAAAATTTTAATTGTTGCTTTGTATAATTGCTCAGCTTT
TGGCTAATGGTGATAAGTATTGTGTCTGTACATACACCCATAGAAAATGTCCAAAAAATC
TCTATCAAATATATTAATACCAACAACAACATTGCACTATGGTTTGCAGCATTCTGTAGA
ATTCTATGAACTAAATTTTTTCTCCGTTGTTTACCAGCATCCTCTATAATCAGTGCATTC
ATATGTAATTATGGTTACCTTGTTTTGCAACTATGTACAAATTACTTTCTAACTTAATTT
TGGTTGTATTGTGTATATAAAACATTTA

InterProScan

PANTHER
TGFB_receptor (IPR000333) - T[13-495] 3.2E-191
Pfam
Activin_recp (IPR000472) - T[14-96] 1.1E-12
SMART
GS_dom (IPR003605) - T[166-198] 5.5E-10
ProSiteProfiles
GS_dom (IPR003605) - T[166-197] 16.272
Pfam
GS_dom (IPR003605) - T[168-196] 1.4E-13
SUPERFAMILY
Kinase-like_dom_sf (IPR011009) - T[184-484] 7.93E-66
SMART
Prot_kinase_dom (IPR000719) - T[198-487] 1.2E-22
ProSiteProfiles
Prot_kinase_dom (IPR000719) - T[198-488] 36.174
Pfam
Prot_kinase_dom (IPR000719) - T[200-482] 1.7E-36
ProSitePatterns
Protein_kinase_ATP_BS (IPR017441) - T[204-226] .
ProSitePatterns
Ser/Thr_kinase_AS (IPR008271) - T[322-334] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACV1C_HUMAN 54.545 % 481 4.42E-167
TGFR1_HUMAN 55.123 % 526 0
ACV1B_HUMAN 53.36 % 495 9.15E-173