- Transcript 'KH2012:KH.L22.21.v1....'
Transcript Model
Transcript Id
KH2012:KH.L22.21.v1.A.SL2-1
Possible name(s)
ITGA11; ITGA9; ITGAD
Gene model
Location
KhL22 [159,687 / 175,498]
Amino acid sequence
Length: 1,309
>KH.L22.21.v1.A.SL2-1
QNMRELLKFILICAVLFWQSEAYFLEVRENATNAINFNNTIDVKTTNGALPGYALIASME
QNVISLLAGAPKFSGLYNVGSTGDGAVIKCSANVQPFSSTTKAGNTKWMTDHGCSVVLNT
NAVPTGDNQNKSADAIGMTMIPLGGNKTAVCSPGRRKICGRSLRLSPGACYTGTLGAAMT
MKTGWGEIPCFKNYLDLVYVVDSSNSISDANFTIMKQIIVNASEAFEASIGDTTQVAVLQ
YGNLDSAAFDHTDSKYYKSPTKLGDCNDIDCFNRAIKANMTHLNAANTFTSLAIRRAVEF
DFAQSKNKDKAKKILVLITDGQANFQSQLIVSYRLTQSHNITVYAIGVALKSDAELRISA
NGGVSKERVLDANNYSELSKALRNLTETIAQSSGEGQATGGITLENAVLGVSANYNPKGG
KLFFSGVGSYDGSGAIIKYDSISSTKGDVTSHKQVPGLFPKFPKDSYLGYSIASGYFEGN
GTLYVATGAPRHALLGLVLVYEPQTDNSVSNPRIIKPNNCSSCSTNYKQLGSYFGATLLS
ADINGDGKDDLLVGAPLYIGDNYDEGRVFVYLSQASNSIQAWVNRIRFVPKVFSGMKDVG
GRFGSAISSAGDLNDDGFNDVIIGAPLADNGAGVVYVYHGSNNLKTVYSQRIQSSSLQFP
HLSNFGLSTSSGADLDGNKYPDVVVGAPNSNLAIIFRSRPVARFSAQITLSPPRRDIFEC
LQLPSRKCFNVTSCLTVYGKSVEDFLDVNVMILLDKSKKRLNLGGFNNATKEVKLSRNVT
SCWSYDVYVTKNMIDFVSPLSAEVQYSLTSTHSNTPMSSMVDPAATNKVSTTASFNTGCT
SDLFCSYDLMVNSSITLPKTTNQELNSKLGSDVIIIDKDTATKPIILHVTISNVGENAYG
VKFDVTYSSSLIWNGIKEANILNHRNASCFDEVSTQDQTHGQLKIKSLTYKYNEDLGSIM
PAGDSCSFEIHLLPTNLKTSGVIQNVYAALHVYTMYAPNGNDSNPTNNVANYTRTIRYVS
DVSVTRRESTQFVTREFTFPKTNETVHSVYEIGRNVSTIAVAYEISSEGYSVVPSSSFFL
RYPTNISEHNLLYLYKVSCIGSQGPVMCNCSTQNVNRYHLSTSPNTTDKSGPSILLLPNP
TQLPLSLYNCSSSIVDPPAYCEELHCSVNNLVQGSKVNFVASFRFWSHSVKLVDYPTVTF
VTGFSYTTNQSKLVINKNGSIITEYSAETEVAVKKYVPPVVIEQLNLLLIVIISAAVTLL
LVIAGLGALYKKGFFESEYNKLMKEEKHWQKGNATQERTDEVYDEDLKQ
Nucleotide sequence
Length: 4,245
>KH2012:KH.L22.21.v1.A.SL2-1
TTTATTAACAGAACATGAGGGAATTATTAAAGTTCATATTGATTTGTGCCGTTTTGTTTT
GGCAAAGTGAAGCATATTTTCTTGAAGTGCGAGAAAATGCGACGAACGCTATTAATTTTA
ACAATACGATTGACGTTAAAACGACCAACGGAGCGTTACCTGGATACGCTTTGATTGCAT
CAATGGAACAAAACGTTATCAGTTTGTTAGCGGGTGCGCCAAAGTTCAGCGGGTTGTATA
ATGTTGGATCCACTGGTGATGGGGCCGTCATTAAATGTTCAGCTAACGTCCAACCGTTCT
CTTCAACGACCAAAGCAGGAAACACGAAATGGATGACCGATCATGGCTGCTCTGTTGTAT
TGAATACCAACGCAGTCCCGACCGGCGATAATCAAAACAAATCTGCAGACGCCATTGGAA
TGACTATGATACCGTTAGGGGGAAATAAAACAGCCGTTTGTTCGCCCGGAAGAAGGAAGA
TATGTGGACGTAGTTTGAGGTTATCCCCGGGTGCATGTTACACAGGAACGCTTGGAGCTG
CTATGACTATGAAAACGGGGTGGGGAGAGATACCATGTTTTAAGAACTACCTTGACCTTG
TCTATGTAGTGGACAGTTCAAATTCCATATCAGATGCAAATTTTACCATCATGAAACAGA
TTATTGTCAATGCTTCAGAAGCTTTTGAAGCAAGCATTGGTGATACTACACAAGTCGCTG
TATTGCAATACGGGAACTTAGATTCGGCGGCGTTTGATCACACGGATTCAAAATATTACA
AATCACCAACAAAACTCGGAGATTGCAATGACATCGATTGTTTTAACCGAGCCATCAAAG
CTAACATGACACATCTAAATGCAGCAAACACTTTTACAAGCTTGGCAATAAGAAGGGCAG
TAGAGTTTGACTTTGCACAATCAAAAAACAAAGATAAAGCAAAAAAGATTTTAGTTCTTA
TAACTGATGGTCAAGCAAACTTTCAATCCCAGTTGATTGTGAGTTATAGATTAACACAAT
CGCACAACATCACGGTTTACGCCATCGGTGTTGCTTTAAAATCTGATGCAGAGCTTCGTA
TAAGTGCAAATGGTGGTGTAAGTAAAGAACGAGTATTGGATGCTAATAACTACAGTGAAC
TATCAAAAGCTCTACGAAATTTAACGGAAACAATTGCTCAGTCAAGTGGAGAAGGTCAAG
CCACTGGTGGTATTACTCTGGAAAATGCAGTGCTTGGAGTTTCTGCTAACTATAATCCAA
AGGGAGGAAAATTATTTTTCAGTGGTGTTGGGTCTTACGATGGTTCAGGTGCAATAATAA
AATATGATTCAATAAGCAGCACCAAAGGTGATGTTACCAGTCATAAACAAGTCCCAGGAC
TCTTTCCAAAGTTTCCAAAAGATTCTTATTTAGGCTATTCCATTGCTTCTGGCTACTTTG
AAGGAAATGGCACACTGTATGTAGCAACTGGAGCACCAAGACATGCACTACTAGGACTGG
TTCTTGTGTATGAGCCTCAAACTGACAACAGCGTCAGTAACCCCAGAATCATCAAACCGA
ATAATTGTTCTTCCTGCTCAACTAACTACAAACAACTTGGAAGTTATTTTGGCGCAACAT
TGCTCTCTGCTGACATCAATGGTGATGGAAAAGATGATTTACTTGTTGGGGCTCCTCTAT
ATATCGGTGATAATTATGATGAAGGAAGAGTCTTTGTTTATCTCTCTCAAGCTTCAAACT
CCATACAAGCTTGGGTAAACAGAATTAGGTTCGTACCAAAAGTATTTTCCGGAATGAAAG
ATGTGGGTGGTCGATTCGGTTCAGCAATTTCATCGGCAGGAGATCTTAACGATGATGGTT
TTAATGATGTCATAATTGGTGCACCGCTGGCGGACAATGGGGCAGGAGTTGTGTATGTTT
ATCACGGCTCAAACAATTTGAAAACTGTTTATAGCCAGAGAATCCAATCTTCATCATTGC
AATTTCCACATCTTTCAAACTTTGGATTGTCAACTTCATCTGGTGCAGATCTTGATGGAA
ATAAATATCCAGATGTAGTGGTGGGGGCACCAAATAGCAATTTAGCTATTATATTCAGAT
CTCGCCCTGTTGCTCGATTCTCAGCTCAAATAACTTTGAGTCCACCAAGAAGAGATATAT
TTGAATGTTTACAATTGCCAAGTAGAAAATGTTTTAATGTTACTTCATGTTTAACAGTTT
ATGGAAAATCAGTTGAAGATTTTCTTGATGTTAATGTTATGATCTTGCTCGATAAATCCA
AGAAACGTTTAAATCTTGGTGGTTTTAATAATGCAACCAAAGAAGTTAAATTGTCGCGGA
ATGTCACGAGTTGTTGGTCATATGATGTTTATGTAACAAAAAATATGATAGATTTTGTCA
GTCCGTTATCTGCTGAGGTTCAGTATTCTCTTACTTCTACTCACAGCAACACACCTATGT
CCTCTATGGTTGATCCGGCTGCAACCAACAAAGTGAGCACAACTGCCAGTTTTAACACTG
GATGTACAAGTGATCTATTTTGTTCATATGATTTGATGGTAAATAGCAGCATTACACTAC
CCAAAACTACAAATCAGGAATTAAATAGTAAGCTCGGGAGCGATGTGATCATTATTGATA
AGGACACTGCTACAAAGCCAATAATTTTACATGTGACCATTTCTAATGTTGGTGAGAATG
CATATGGTGTGAAATTTGATGTAACTTATTCATCTTCACTTATATGGAATGGGATAAAAG
AAGCAAACATTTTAAACCACAGAAACGCAAGTTGTTTTGATGAAGTGAGTACACAGGATC
AAACTCACGGGCAATTGAAAATCAAATCTTTGACTTATAAATATAATGAAGACTTAGGAA
GCATCATGCCAGCTGGAGATTCGTGTTCATTTGAAATCCACCTCCTACCAACCAACCTCA
AGACAAGTGGAGTCATACAAAATGTGTATGCCGCACTACATGTATACACAATGTATGCTC
CTAATGGTAATGACAGCAATCCTACAAACAATGTGGCAAACTACACACGCACAATACGTT
ATGTATCTGATGTATCGGTAACCAGAAGAGAGTCTACCCAATTTGTGACTAGAGAATTTA
CTTTCCCCAAAACAAATGAGACGGTGCATTCTGTTTATGAGATTGGTAGAAATGTCTCTA
CAATAGCTGTTGCATATGAGATATCTAGTGAAGGTTATTCTGTTGTCCCATCGTCAAGTT
TTTTCCTTCGTTACCCAACTAACATATCAGAACATAATCTTCTCTATTTATACAAAGTTA
GCTGCATTGGATCTCAGGGGCCGGTAATGTGCAACTGTAGCACGCAAAATGTTAACAGAT
ATCATTTATCTACCTCACCCAATACCACAGACAAATCTGGTCCCAGTATCCTGTTGTTGC
CTAACCCTACACAACTTCCACTGTCTTTATATAACTGTTCCAGCAGCATAGTTGATCCAC
CAGCATACTGTGAAGAGCTGCACTGTTCAGTAAATAATCTTGTTCAAGGATCTAAAGTTA
ACTTTGTAGCAAGTTTTAGATTTTGGTCGCATTCTGTTAAACTCGTTGATTATCCCACTG
TTACTTTTGTTACTGGATTTTCTTACACAACAAATCAGTCAAAGTTGGTTATCAATAAGA
ATGGATCAATAATCACAGAATATTCTGCTGAGACAGAAGTTGCTGTGAAGAAGTACGTTC
CACCTGTTGTAATAGAGCAACTAAACCTTTTGTTGATCGTTATTATATCTGCTGCAGTTA
CTTTGCTTCTTGTTATTGCGGGTCTTGGAGCATTGTACAAGAAAGGATTTTTCGAAAGTG
AATACAACAAATTAATGAAAGAAGAAAAACATTGGCAGAAAGGTAATGCTACACAAGAAA
GAACTGATGAGGTGTATGATGAAGATTTAAAACAATAGATTGTGAAGTTATTATTTGTGA
AATTTCTAAACTATATTTTTTGTTATATATATATATATCTGTATTTTAAACTTTTTTTAT
TTTAGTGTGATTTTCTTATTTTCTTTTGCATTTATATCAAAACGGTTTTATTTTATAACG
CGATGCCCATCAAAGAAATGTTGGCATTAAACACACATGTTTAATAATTAACTATTGAAA
CTCAAGTGTCTGAGTAAATAGAACTTTCGAAAGTTTATGCCTCGCTATTATGGCTTGACT
TAATCGTTATTGTATGTCAGTATTTAGTCGCGTAAAGTATTGCGT
| SMART |
Int_alpha_beta-p (IPR013519) - T[47-102] 190.0 - T[464-515] 0.0044 - T[530-587] 4.8E-10 - T[599-653] 6.9E-12 - T[661-711] 6.2E-6 |
| Gene3D |
Integrin_alpha_N (IPR028994) - T[127-191] 2.3E-107 - T[399-700] 2.3E-107 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[190-389] 8.75E-27 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[192-394] 2.3E-107 |
| SMART |
VWF_A (IPR002035) - T[194-390] 1.3E-14 |
| Pfam |
VWF_A (IPR002035) - T[196-379] 9.1E-19 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[196-389] 20.203 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[454-510] 8.994 - T[519-580] 13.625 - T[589-647] 11.957 - T[650-713] 12.751 |
| PRINTS |
Integrin_alpha (IPR000413) - T[465-477] 8.6E-48 - T[527-547] 8.6E-48 - T[602-626] 8.6E-48 - T[665-686] 8.6E-48 - T[692-711] 8.6E-48 - T[795-808] 8.6E-48 - T[1258-1277] 8.6E-48 |
| Pfam |
FG-GAP (IPR013517) - T[534-571] 8.9E-9 - T[604-638] 1.1E-5 |
| Pfam |
Integrin_alpha-2 (IPR013649) - T[698-1127] 4.8E-35 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[700-839] 3.3E-11 - T[844-929] 2.25E-5 - T[1043-1216] 1.92E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITA9_HUMAN | 31.21 % | 202 | 4.97E-53 |
| ITAD_HUMAN | 27.632 % | 201 | 1.59E-52 |
| ITA11_HUMAN | 26.36 % | 214 | 2.84E-56 |
