- Transcript 'KH2012:KH.L18.9.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L18.9.v1.A.SL1-1
Possible name(s)
PRDM9; ZNF768; ZSCAN22
Gene model
Location
KhL18 [356,521 / 360,030]
Amino acid sequence
Length: 510
>KH.L18.9.v1.A.SL1-1
GYFILFGKVMVKKSIVSLGKSHQAVVQYFKCYASVFEHDIAAISSLLQRKNIRKASYHSW
PDANNQKVVWSLTLNDNSDIKTTIRELDDFKEERRLVSRAAALELLLLESDIHFSDNNMV
FTSTSSSPILTQLRKFRKEKRFCDFTINLDGKSFAVHKLLLVASSNYFCEIIKDNQTSVD
IGGIKAEIFETMLCYIYAEDVAVNESNIFELKENASLYELQGLVDMCMLFQDFVGAVTKI
PEIKLDSLPEAKSAIGNKKPGETESMVHVRKSERQAKREAYNTISKTINLVEEPDDISTD
DRFLPVTEENHVLPQKENIENHNRTHSVEVTKSQVEQIDNVSMLELQAASVPFVLKCEIC
HVELEDQKQRKAHMKKHFVQNQPNRFGCHLCMKAFRSASHLKRHMISHTGIRKHCCTTCG
KLFLKSDHLKRHERTHTSERPFTCEQCGKQFRDKDHLKRHNLTHTEERPYFCEVCGKQFK
DKSTLLSHQKSHNANNSVVCGVCGRCKLFV
Nucleotide sequence
Length: 1,535
>KH2012:KH.L18.9.v1.A.SL1-1
AAGGCTATTTTATATTATTTGGTAAAGTCATGGTAAAGAAAAGTATCGTGTCACTTGGAA
AGTCACATCAGGCTGTTGTTCAATATTTCAAATGCTATGCATCTGTATTTGAGCATGATA
TTGCAGCTATTTCATCACTTCTGCAAAGGAAAAATATAAGAAAGGCCTCCTACCATAGCT
GGCCAGATGCAAACAACCAGAAAGTGGTTTGGTCGTTAACATTGAATGACAACTCAGATA
TCAAAACCACAATAAGGGAATTGGATGATTTTAAAGAAGAGCGAAGATTGGTTAGTCGGG
CAGCTGCCTTAGAATTGCTGTTGTTAGAATCAGATATTCACTTCAGTGACAACAACATGG
TTTTCACATCAACTTCTTCATCACCAATTCTCACACAACTAAGGAAATTTCGAAAAGAAA
AAAGATTTTGTGACTTTACTATTAATTTAGATGGTAAAAGTTTTGCTGTCCATAAACTGC
TGTTGGTTGCTTCTTCAAACTATTTCTGTGAAATCATAAAAGACAACCAGACCTCAGTAG
ATATTGGTGGAATAAAGGCAGAAATATTTGAAACAATGTTGTGTTACATTTATGCTGAAG
ATGTGGCTGTTAATGAATCAAATATCTTCGAGCTTAAAGAAAATGCAAGCCTTTATGAAC
TGCAGGGATTGGTGGATATGTGCATGTTGTTTCAAGATTTCGTAGGAGCAGTGACAAAAA
TTCCAGAGATCAAATTGGACTCTCTTCCAGAAGCAAAATCAGCCATTGGAAATAAGAAAC
CTGGAGAAACAGAATCTATGGTCCATGTGAGGAAAAGTGAGAGGCAAGCTAAACGAGAAG
CATATAACACTATAAGCAAAACAATAAACCTGGTGGAAGAGCCCGATGACATCAGTACAG
ATGACAGATTTTTACCAGTGACAGAAGAAAATCATGTTTTACCACAAAAAGAAAACATTG
AAAATCATAACAGGACACACAGTGTAGAAGTGACAAAGTCGCAAGTTGAACAAATTGACA
ATGTTTCCATGCTGGAATTACAAGCAGCAAGTGTTCCTTTTGTTCTGAAATGTGAGATCT
GCCATGTTGAGTTGGAAGATCAAAAACAGAGGAAAGCCCACATGAAGAAACACTTCGTGC
AGAATCAACCGAATAGATTTGGATGCCATCTTTGTATGAAAGCTTTTCGAAGTGCAAGTC
ACCTAAAGAGACATATGATATCACACACAGGTATCCGAAAACATTGCTGTACAACGTGTG
GAAAACTATTTTTGAAGTCTGATCACTTGAAGCGGCACGAACGTACGCATACCAGTGAAC
GACCATTCACTTGTGAGCAGTGTGGAAAACAATTTAGAGATAAAGATCATTTAAAAAGGC
ACAATTTAACGCATACTGAGGAGAGACCTTACTTCTGTGAGGTGTGTGGAAAGCAATTTA
AAGATAAAAGTACTTTACTCAGCCACCAGAAAAGCCACAATGCTAATAACTCTGTGGTTT
GTGGTGTTTGTGGCAGATGTAAGTTATTTGTGTGA
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[120-228] 5.49E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[134-230] 7.7E-20 |
| SMART |
BTB/POZ_dom (IPR000210) - T[143-235] 7.3E-17 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[143-205] 16.032 |
| SMART |
Znf_C2H2_type (IPR013087) - T[355-377] 0.54 - T[386-408] 0.03 - T[414-436] 2.1 - T[442-464] 6.7E-4 - T[470-492] 3.0E-4 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[356-408] 7.21E-5 - T[394-451] 4.88E-18 - T[440-492] 5.26E-17 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[386-413] 12.819 - T[414-441] 15.459 - T[442-469] 15.895 - T[470-497] 13.048 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[388-408] . - T[415-436] . - T[444-464] . - T[472-492] . |
| Pfam |
Znf_C2H2_jaz (IPR022755) - T[470-492] 3.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZSC22_HUMAN | 35.26 % | 128 | 4.33E-32 |
| PRDM9_HUMAN | 42.208 % | 132 | 1.23E-32 |
| ZN768_HUMAN | 45 % | 125 | 7.1E-31 |
