Aniseed - Transcript Card

Transcript 'KH2012:KH.L18.2.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.L18.2.v2.A.SL2-1

Possible name(s)

MDH1; MDH1B

Gene model

KH2012:KH.L18.2

Location

KhL18 [716,407 / 718,030]

Sequences

Amino acid sequence

Length: 242

>KH.L18.2.v2.A.SL2-1
ERRAQAALARKMQVNASGVTNVVSWGNCANDAAKNTYCIDVLSAAVRGYDGAIWGPQWHS
RSLAELVYDKKWLNDEFVEEHASHNAKMIKSMKHSTSLSEASSISSMLHDWIQGSESENV
YSLGVESEGWYGVSGCVFSMPVQFKDGSYQVVWGLTLNDEVRDKIKKIELELKKDLRVAF
KVEDEMENEVFGEDSALISSMMSQIESPTKTPGEKLEVIREEDAEEQPAEDVGEQPLVKK
TE

Nucleotide sequence

Length: 817

>KH2012:KH.L18.2.v2.A.SL2-1
GAACGGCGTGCACAGGCAGCTTTAGCTCGTAAAATGCAAGTTAATGCATCTGGTGTAACA
AATGTAGTTTCATGGGGGAACTGTGCAAATGATGCAGCAAAAAACACATACTGTATTGAT
GTATTATCAGCAGCTGTCCGTGGTTATGATGGAGCAATATGGGGACCACAGTGGCATTCC
AGATCGCTGGCGGAACTTGTCTATGATAAAAAATGGCTAAATGATGAATTTGTTGAAGAA
CATGCTTCACACAATGCTAAGATGATAAAGTCAATGAAACATTCCACTAGTTTAAGTGAA
GCATCTTCAATATCTTCCATGCTACATGACTGGATTCAAGGTTCAGAGTCGGAAAATGTT
TATTCTCTTGGAGTGGAAAGTGAAGGTTGGTATGGAGTCTCTGGCTGTGTTTTCTCAATG
CCTGTCCAATTTAAAGATGGTTCGTACCAAGTTGTATGGGGTCTGACGCTCAATGATGAA
GTTAGAGACAAAATCAAGAAAATTGAATTGGAGTTAAAAAAGGATTTGCGAGTTGCGTTT
AAAGTAGAGGATGAAATGGAGAATGAGGTGTTTGGTGAAGATTCTGCTCTCATCTCCTCT
ATGATGAGTCAGATTGAGTCACCGACCAAAACCCCTGGTGAGAAGCTTGAGGTCATCCGA
GAAGAAGATGCAGAGGAACAACCTGCAGAAGATGTGGGGGAGCAGCCACTGGTGAAAAAG
ACGGAGTGATGATCTTTCTCTCTTTCCTTGTATTTATAATCGCACTTACTGTGTCTCATG
TTGTGTAAGTTTTTAATAAAAGTATTAAATTTACGAA

InterProScan

PANTHER	Malate_DH_type2 (IPR010945) - T[1-187] 4.7E-64
Gene3D	Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[1-190] 4.5E-45
SUPERFAMILY	Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[2-182] 2.01E-28
Pfam	Lactate/malate_DH_C (IPR022383) - T[3-181] 1.9E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MDH1B_HUMAN	35.256 %	98.6	1.13E-23