- Transcript 'KH2012:KH.L18.14.v2....'
Transcript Model
Transcript Id
KH2012:KH.L18.14.v2.A.SL1-1
Possible name(s)
CNBP; ZCCHC13; ZCCHC9
Gene model
Location
KhL18 [81,432 / 85,976]
Amino acid sequence
Length: 307
>KH.L18.14.v2.A.SL1-1
TNCKKGITMPGRMNNSRETYSSREIYNPRESYSSRETYTPRETYDYQSRKPSNDNCFICD
KSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYGTRQRDADVC
YKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENACYN
CYKEGHLARDCPEDNACYKCGKAGHLARKCPEDADRNGDARLNRREAGTKQCYLCQNVGH
IQANCPEATCYRCHGEGHIARDCPNGNEECYNCRRPGHKARDCDEPRPGELSNEDDGNEE
EKELNDA
Nucleotide sequence
Length: 1,720
>KH2012:KH.L18.14.v2.A.SL1-1
AATTTTCTAATAAACAAACTGCAAAAAAGGTATAACAATGCCTGGTCGTATGAATAACTC
AAGGGAAACTTACAGCTCAAGGGAAATATATAACCCGAGGGAATCCTACAGCTCAAGGGA
AACTTATACCCCAAGAGAAACTTATGACTACCAGAGTCGCAAGCCTTCCAATGACAACTG
CTTCATCTGTGACAAGTCAGGTCACTGGGCTCGTGAATGTCCCGAATCGGATGAGCAGCA
GAGAGAATATGCTCCGAGGACCCGTGGAGGATTCCGGGGAAGAGGGAGAGGACGGGGCAG
GGGTCGTGGAAGTTATGGGGGTTACGGGGGTTATGGAGGTTATGGAACACGACAGCGTGA
TGCTGATGTTTGCTACAAATGTGGAACCCCTGGTCACTTTGCAAGAGAATGCCCAAATGA
CGCAGCTGATGGAATACAAAGAAATGAAGACAGAAGGCCAATGGGTCGTCGCAACAACGA
TTACTGCTTTCGCTGTGGTCAACCTGGCCACATGGCCCGTGACTGCTTGTCTGCTGAGAA
TGCATGCTACAATTGCTACAAAGAAGGCCATCTTGCACGTGACTGTCCAGAGGACAATGC
GTGCTACAAATGCGGTAAAGCGGGTCATCTTGCACGCAAGTGTCCCGAAGATGCAGACAG
AAATGGTGATGCACGCTTAAACCGTAGAGAGGCAGGAACAAAGCAATGCTACCTTTGTCA
AAATGTCGGACATATCCAGGCAAATTGCCCAGAGGCTACTTGCTATCGTTGCCACGGTGA
AGGCCATATTGCACGTGATTGCCCGAACGGCAATGAAGAATGTTACAACTGTCGAAGACC
TGGTCACAAGGCTCGTGACTGTGACGAGCCACGTCCTGGAGAACTAAGCAACGAGGATGA
TGGAAATGAGGAAGAGAAGGAGCTGAATGATGCTTAGGTGTCACTCGCACCTGCAACTCC
GGACATCCCTAAAATTAACGTAATTTTTGAGAAGTAGATACTTTTAAGTGAGCCTGACAA
CTACGCGTTTGTGAGTGTGGACTAATGTCATCATTGTAGCTGTCATGGGAATCAAAGATG
CAGCAAAACCTCTATGGTTCGGTGGATTGGATATAAAGAGTCGTCCAAGTTGTTTTTGGT
GAACGTGGATCTGTTTTGCTGGACAATCTTATTGTTTACTTCGGTTAATTTTAAATTCTT
CAATCATTTTTAGTCTATACAAATTAAATGACGACCCCTTTTACCCAAAATTGTACAAAT
TAAATTAAAATATGTGAAGTTGAAAAAAGCAACTGTTTCTACTCCCAGACTACTTTTAGT
TGACCTGAAATGATGTTTTAAATAATCTAGGTTTGAATGTTTTATAATTATGTGCGGGTT
CCATGCGTTTTACTTCCACATTAATTTTCAACTATTTGTTAAACCCTAAATCCCTCATTT
GTATAAAAATGCTGGTTCAGGCAACTAAGAAATGGGGTTAGTTGCTGTGTGCTTTCTAAA
CGCCGCCGAAATAGAGCAAATGATAATGTCCTTGCATTGCATGATAAAAAATTTCCAAAA
CTTGTACCAAAAAGGGCATGTACTTATTTGATTCCATACCAAACCTGTTGTTTACAGTTC
ACGATTTGTATCTTTTTCTTAACATGTTTACTATTTGTTAAAACTTTCGCACCCATCTCG
GTTAAAAGTGTTTGGATACAATAAACCAACTTGTGACAAA
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[45-78] 1.44E-9 - T[113-171] 1.28E-9 - T[176-213] 1.31E-12 - T[223-247] 5.58E-5 - T[249-287] 1.13E-10 |
| Pfam |
Znf_CCHC (IPR001878) - T[55-71] 6.5E-6 - T[119-135] 3.1E-8 - T[157-171] 6.9E-7 - T[177-193] 2.5E-6 - T[196-212] 1.8E-6 - T[231-247] 2.7E-4 - T[249-265] 1.6E-5 - T[269-285] 6.0E-6 |
| SMART |
Znf_CCHC (IPR001878) - T[55-71] 2.2E-4 - T[119-135] 5.3E-6 - T[157-173] 4.4E-5 - T[177-193] 3.0E-5 - T[196-212] 2.4E-5 - T[231-247] 0.0066 - T[249-265] 1.4E-5 - T[269-285] 0.0022 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[56-71] 9.916 - T[120-135] 11.317 - T[158-171] 11.219 - T[178-193] 10.905 - T[197-212] 11.466 - T[232-247] 8.862 - T[250-265] 10.444 - T[270-285] 10.18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNBP_HUMAN | 39.444 % | 118 | 1.73E-32 |
| ZCH13_HUMAN | 38.596 % | 79.3 | 5.2E-18 |
