- Transcript 'KH2012:KH.L17.3.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L17.3.v1.A.ND1-1
Possible name(s)
BNC1; BNC2; SALL3
Gene model
Location
KhL17 [68,729 / 71,715]
Amino acid sequence
Length: 639
>KH.L17.3.v1.A.ND1-1
FEEKFILVCFVRYKETFKLAKQIMLADYEVKPTKIDSICVCDVIKAKQFFNSQPLYDSYV
PSESSNHNAPSNRKRQRKSTCPYRRHGPDVTMTYDETASPVTSEVSSISPMSNKAKQLDD
VIKDPLPCNNEVIKRRHSTGELSRTLLRHKRSLSLPTIAQPRPGKIEDAPVAVPPQPHVI
SAKPNDDIYSGGEIHGGVWIPTRSRNCHLCGKEFKNVYSVKLHIKNVHLKEMWQCSVGGC
TATFPSKRSRDRHSANVNLHSKLRLRGLYSDPCISNQTSGMAESLREKLLPTLFCHQQAA
STTPSQSTSCDVTNVLSDSNRDVMTSQYENSSFRKTYEKFYKKALKFYESNQPEPIAYDV
ANNMNRHKQRSKSSVTQPTFNDVKDDVMFVRKFSLPDVTVCQNDVTVRHDEVTVCHDDVI
RYKPGFPSGWFPQYKSFNGNSRMVEPTGSRRKSEPFPPTNDIVTSSMKRRISSVERFPSM
PSYPGWCSNLYHPYTRIQGVTQQTNHGDALLRHNWMNATLLAAAFSGNRPTAPLNGFPGP
MDDVIYSGRSEAMTSCDDVTELDDPTLCMGGNTWKTGPVQCNICKRMYSNKGTLRVHFKS
VHLREMHQCTVPGCDMMFTSVRSRNRHSQNPNLHRSIKI
Nucleotide sequence
Length: 2,067
>KH2012:KH.L17.3.v1.A.ND1-1
TTTGAGGAGAAATTTATCTTGGTTTGTTTTGTTCGTTATAAAGAAACGTTCAAGTTGGCC
AAGCAGATTATGTTGGCGGATTATGAGGTCAAGCCAACAAAGATCGATTCAATTTGCGTC
TGTGACGTCATCAAAGCAAAACAATTCTTCAACAGTCAACCACTCTATGACAGTTATGTC
CCATCAGAATCATCCAACCATAACGCGCCATCAAACCGAAAACGACAGCGGAAGTCGACG
TGTCCGTACCGACGTCACGGCCCTGACGTCACTATGACGTATGACGAAACAGCGTCCCCT
GTGACGTCAGAGGTGTCTTCAATTTCACCGATGTCAAACAAAGCAAAACAACTCGATGAC
GTCATAAAGGATCCATTGCCATGTAACAATGAAGTGATAAAGCGACGTCACAGTACCGGC
GAGTTATCGCGGACATTGCTACGTCACAAACGATCGCTGTCCCTCCCCACGATCGCCCAA
CCACGACCTGGTAAAATTGAAGATGCCCCGGTGGCGGTTCCCCCCCAACCCCACGTCATA
TCCGCTAAACCAAACGACGATATATACAGCGGTGGCGAAATACATGGTGGGGTTTGGATT
CCAACTCGGTCAAGGAATTGTCATTTATGTGGAAAGGAATTCAAGAATGTGTACAGTGTA
AAGCTTCATATAAAGAACGTTCATTTAAAAGAGATGTGGCAATGCAGTGTGGGGGGTTGT
ACAGCGACATTTCCATCGAAACGAAGCAGAGATCGACATAGCGCAAATGTTAATCTACAT
AGTAAGTTACGACTACGAGGTTTATACAGCGACCCGTGCATTAGCAATCAAACAAGCGGC
ATGGCTGAAAGTTTGAGGGAAAAACTATTACCAACTCTCTTCTGCCACCAACAGGCCGCA
TCAACGACTCCTAGTCAATCAACTTCCTGTGACGTCACAAACGTTTTAAGCGATAGTAAT
CGGGATGTTATGACATCACAATACGAAAATTCGTCATTCAGGAAAACTTATGAAAAGTTT
TATAAAAAAGCTTTAAAGTTTTATGAAAGCAACCAACCAGAACCTATCGCTTATGACGTT
GCAAACAACATGAATCGTCACAAACAAAGATCGAAGAGCTCTGTGACGCAACCAACATTC
AATGACGTCAAGGATGACGTCATGTTTGTACGTAAATTTTCTTTACCTGACGTTACAGTA
TGTCAAAATGACGTCACAGTACGTCATGATGAAGTCACAGTATGCCATGATGACGTCATA
CGTTATAAACCAGGATTCCCATCCGGGTGGTTTCCCCAATATAAAAGTTTCAACGGTAAC
AGCCGCATGGTGGAGCCAACGGGAAGTCGAAGAAAATCTGAACCTTTCCCGCCAACAAAC
GACATTGTGACGTCATCAATGAAACGTCGAATATCATCGGTTGAACGATTTCCGTCGATG
CCGTCGTACCCTGGGTGGTGTTCGAATCTATACCATCCATACACAAGAATACAGGGTGTG
ACGCAACAAACCAACCATGGTGACGCTTTATTACGTCATAATTGGATGAACGCTACTCTG
CTCGCTGCTGCCTTTAGCGGTAACAGACCAACAGCGCCACTTAACGGATTTCCTGGACCG
ATGGACGACGTCATATACTCGGGACGATCGGAAGCAATGACGTCATGTGATGACGTCACT
GAGTTAGATGACCCGACCCTATGTATGGGTGGAAACACATGGAAGACGGGGCCAGTACAG
TGTAATATATGTAAACGCATGTACAGCAATAAGGGGACATTGAGAGTCCATTTTAAATCT
GTACATTTACGTGAAATGCATCAATGTACAGTCCCTGGTTGCGATATGATGTTTACATCT
GTACGTAGCAGGAACAGACATAGTCAAAACCCTAATCTACATAGAAGTATTAAAATATAA
ATCTTAATGATGTAAAACTTTATTTATTGTTTGCATCACAATGTACCACTGTGACGTCAT
GTGCCAATCCTCTAGGTATTGTTACGTCACACTTGCTTTGTGATGTCATTCACTTTCATA
CTCGAATGTGGAAAGTGCTGTAAAGTA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[205-233] 9.619 - T[579-607] 9.577 |
| SMART |
Znf_C2H2_type (IPR013087) - T[205-228] 0.094 - T[233-260] 5.1 - T[579-602] 0.012 - T[607-634] 0.41 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[207-228] . - T[581-602] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[576-606] 5.98E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BNC2_HUMAN | 68.056 % | 115 | 1.16E-26 |
| BNC1_HUMAN | 66.667 % | 103 | 7.46E-23 |
