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TRANSCRIPT CARD

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  1. Clone 'cima8914' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Molecular Tool 'Ci-MRF-MO1640 (Meedel 2007)' > 
  4. Molecular Tool 'Cirobu.Tbx6-r.b>Moocci.Lhx3/4.a' > 
  5. Transcript 'KH2012:KH.L172.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L172.2.v1.R.ND1-1

Possible name(s)

MRAS; RAP1B; RRAS2

Gene model

KH2012:KH.L172.2

Location

KhL172 [44,887 / 48,290]

Sequences

Amino acid sequence

Length: 210

>KH.L172.2.v1.R.ND1-1
ILWCGCTGRSKMATVPNQNENLTTYKLVVVGDGGVGKSALTIQFFQKMFVEEYDPTIEDS
YIQHTDIDGQWCILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDRASYDHVPEFHDL
ILRVKDETQFPALLVANKVDLVHQRVVEEDEGKEMARQFQIPYIETSAKDPPQNVDKAFQ
DIVRLIRQQGLQQNGTTTGGRESKGCCQVM

Nucleotide sequence

Length: 1,239

>KH2012:KH.L172.2.v1.R.ND1-1
GTTCCAGGTTTTTCTGTTTTTAAGAAACTGTTGAATTAATTTAAAGGAAAGAATTTGTTT
TTTCTGGAATCGTAGTTCTCTAAATACTTTGGTGCGGCTGCACCGGGAGATCAAAGATGG
CGACCGTGCCGAATCAGAATGAGAACTTAACGACATATAAGTTGGTCGTGGTTGGCGATG
GTGGTGTCGGGAAGAGCGCGCTCACCATCCAATTCTTCCAAAAGATGTTCGTTGAAGAAT
ATGATCCAACTATAGAGGATTCATATATCCAACACACAGATATCGATGGACAGTGGTGTA
TTTTAGATGTGCTCGACACAGCCGGCCAGGAGGAATTTAGTGCAATGCGTGAACAATACA
TGAGAACAGGTGATGGTTTCCTTATCGTGTACAGCGTAACGGACCGCGCAAGTTACGATC
ACGTACCAGAGTTCCACGATCTTATTCTAAGGGTAAAAGATGAAACACAATTCCCCGCCC
TCCTAGTGGCCAACAAAGTTGATCTTGTGCACCAGCGAGTGGTGGAAGAAGACGAGGGGA
AGGAAATGGCGCGACAATTCCAGATTCCTTACATTGAAACGAGCGCCAAAGACCCTCCGC
AAAACGTTGATAAAGCTTTCCAAGATATTGTTCGTTTAATAAGGCAACAAGGTCTTCAAC
AAAACGGGACGACCACCGGAGGTCGGGAGAGCAAAGGATGTTGTCAGGTTATGTAGCTCC
ACCTAGAGGCCAAATACGACGAAATTATTCGGCGCTGAATCATCGATTAAATGCCGAGTC
ATCGGAAACAAAATTGCAGACAGTTGTTGCACTTACAATAATATTATGATGTCATAGATG
GGGTTGTTATATCTCACCTCACATGGGTGCTTCCCCCTGGTCGATATCATTTCAGGGGAT
TACCCCTGTTCAGTTACTGCTACAAAGTTTTTATAACCAACATAGAAATCATATTTCTGT
GGAGTTTAATTTTATGAAAATGAAATGACGTAATAACCACGATTGTGACGCATGGTGACG
TTTTAAATTTCTTCAACGAAAATTTCTTTCTCGAAACTAATTTTGACTAATCTGGTGAAA
CTGCCGCGTGGTGGCGCCAACCACCCCTGAAATAAATTCCTAGTTTTGATGTTTCTATGT
TGCTACATCAAAGTGGTTGATTATGACGGGACAATCATCTAAGCGTGACACGGTTGAACA
ATGAGATGGGAAGGTGTATTTGTGATGTCATAGTTATCG

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[20-210] 40.754
PANTHER
Small_GTPase_Ras (IPR020849) - T[22-194] 1.1E-69
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[23-180] 1.0E-30
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[23-192] 2.56E-51
Pfam
Small_GTPase (IPR001806) - T[26-187] 9.5E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 47.059 % 177 1.68E-56
RASM_HUMAN 76.404 % 265 7.51E-91
RRAS2_HUMAN 56.452 % 186 5.69E-60