Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C14.191.v3...' > 
  2. Transcript 'KH2012:KH.C12.370.v1...' > 
  3. Transcript 'KH2012:KH.C11.39.v1....' > 
  4. Transcript 'KH2012:KH.C11.39.v2....' > 
  5. Transcript 'KH2012:KH.L171.13.v1...'

Transcript Model

Transcript Id

KH2012:KH.L171.13.v1.B.nonSL1-2

Possible name(s)

OPN1LW; OPN1MW2; OPN1MW3

Gene model

KH2012:KH.L171.13

Location

KhL171 [206,362 / 207,370]

Sequences

Amino acid sequence

Length: 214

>KH.L171.13.v1.B.nonSL1-2
INHYLAGNKRSIMNQWLETIMNERKFEIVNSSLQGLLKPDSLGMDHDVTPTVDLTDGVPQ
CKDLNPYVLKGDGWVPQHISRANRSTYSFLCVYMTFVFLLSCSLNILVIVATLKNKVLRQ
PLNYIIVNLAVVDLLSGFVGGFISIAANGAGYFFWGKTMCQIEGYFVSNFGVTGLLSIAV
MAFERYFVICKPFGPVRFEEKHSIFGTKLFQNTN

Nucleotide sequence

Length: 660

>KH2012:KH.L171.13.v1.B.nonSL1-2
ACATAAACCATTATTTAGCAGGAAATAAACGCAGCATTATGAATCAGTGGTTGGAAACCA
TTATGAATGAAAGGAAGTTCGAAATTGTGAACAGCTCGCTACAGGGTTTGTTAAAACCGG
ATTCACTGGGTATGGATCATGACGTAACACCAACTGTTGACTTGACTGACGGAGTTCCAC
AATGTAAAGATCTTAACCCTTACGTACTAAAAGGAGATGGTTGGGTGCCTCAACATATAA
GTCGGGCCAATCGTTCAACGTATAGTTTCCTTTGTGTTTACATGACATTTGTCTTTCTGC
TGTCTTGTTCTCTCAACATCCTTGTTATAGTGGCCACTTTGAAAAACAAGGTTCTTCGTC
AGCCTCTGAATTACATTATTGTGAACCTAGCAGTTGTCGATCTTCTAAGTGGTTTCGTTG
GCGGGTTTATTAGCATTGCTGCTAACGGTGCGGGATATTTTTTCTGGGGGAAGACAATGT
GCCAGATTGAAGGATATTTTGTTTCAAATTTTGGTGTGACTGGTTTGCTCTCAATTGCTG
TAATGGCATTTGAAAGATATTTCGTAATTTGCAAACCATTTGGGCCCGTTCGCTTTGAGG
AGAAACATTCAATTTTTGGTACCAAACTGTTTCAAAATACTAATTAAGCAAAAACTTGAC

InterProScan

PRINTS
GPCR_Rhodpsn (IPR000276) - T[89-113] 1.8E-10 - T[122-143] 1.8E-10 - T[167-189] 1.8E-10
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[104-214] 17.142
Pfam
GPCR_Rhodpsn (IPR000276) - T[105-198] 2.9E-18
ProSitePatterns
GPCR_Rhodpsn (IPR000276) - T[173-189] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OPSR_HUMAN 49.6 % 118 7.02E-32
OPSG3_HUMAN 48.8 % 118 1.0E-31
OPSG_HUMAN 48.8 % 118 1.0E-31