- Transcript 'KH2012:KH.L170.69.v2...'
Transcript Model
Transcript Id
KH2012:KH.L170.69.v2.A.SL2-1
Possible name(s)
ARHGAP15; SYDE1; SYDE2
Gene model
Location
KhL170 [635,043 / 658,199]
Amino acid sequence
Length: 1,222
>KH.L170.69.v2.A.SL2-1
SRHEEGQPYIGNMNQNNDVDLNGTFKRSLSVPAAVRRKNNKTMLTCTPGGGNVVNGNARL
NRICDRHVVSGKKRDIRVSRFDPAGIDLPFELLKKINDAGSHSEVGKSNIRNGSAHDPLK
PMTSNDKVERRKETRIVRKLISVRRMASFTNRSPKNCCIKTVEIKKEQSETLGIFIKKRK
ISRGTDLSVLPDGTRCKEGIFISRLEPKCKAAVLGLVNPGDQLLAINTVEVSHLSVQMVA
AIMAIVQHMSLTIRTPHSNENESKRTASPKVNSESKLNEKFDESFQILLEAIACLDKPNN
TNNNSSLKTPPLPPKLNPKTKPQETTNENGQRSLLEEILSTVKSNSEEGRQWTSYVSSQN
EEDHALDLGMADTVSLHEPDYDEVADSDDESSLSSSGVEEEVSVDAYSQPLRDASGSSSS
SVNSSLNAESAEILLNHQNTARRSHSIDGANLSELNHRNNINHQDPASGKYNIPPFPTPN
FDRTSDTQPKNTPSVTVDKRREWLNRGTKVSQELQSRLDGTSQPTNNLTKRKNSLDLNLE
NQKPSNQKWFPRSTSKRTTSESSSGSNSNASNSPNTNRTDRKNSLKGILKGSSEKNESLT
KMQKSPSEKSAKRLLSVNSPSSPLHSKTKFFPTPEQSSDVKEKSVNHNKNEASGSKVTSP
GRMRKKNWGMKIMKQFKMIRSSDNASEYRCWVGDEQFDEQFGRGVNPLIRNVTQHNIHKN
IDSNDSAILNRYHLDMSMAQQRRLSRQLLLDNTNTDPSIKPLNLSQFQKYKPLPMVNTQL
STAVDGCLVLTLYGVRELKKTLCEAYCLVQVDDAKTKRIGTTMQTCRGAVAWNQCFEMTV
NQARELHLVLYTWEMRGGKQKVCSHATLNLAHLMHGKRPRDMFSERLAVRLEPRGTLYIK
IGLEHNSSSTGPLVFGADLQSIVDRENKSLGIPSLVNSCIHEVEERGMQVVGVYRLCGSA
IVKKNLRSELEASKNEVKLTAEQYPDVNVITGILKDFLRELPQPLFPPELLEAVTTAMEN
NPEEASEEQKLRTDALLKHIHGLSTAPAEQATLYALLNHLKRVSMHAHQNKMTCQNLAVC
FGPVLLGPVNVGPTKGYLNSIDLSAAIGFKRHIQVLNYMLSNWPDTPVLPPSDINAGDNK
RASQRMSCVSLTRRLSRVSVMEEDGGEDETIRASNDRATLVSLGRSESLNSILETEDNFT
DPNMDYASNASNGFADFAASLV
Nucleotide sequence
Length: 4,496
>KH2012:KH.L170.69.v2.A.SL2-1
TTAGCTTTGTTAAGTATTAATATAGAAGCCAAACTTATGCCAACTGTACATTTGATTCCA
ACCAAGCTTGAAGTAGACATGAGGAGGGCCAACCTTACATTGGGAATATGAATCAAAATA
ATGACGTTGATTTGAACGGAACTTTTAAACGTTCGCTGTCCGTGCCAGCAGCTGTGCGAC
GGAAAAACAACAAAACTATGCTCACTTGCACCCCTGGTGGTGGGAATGTGGTGAACGGAA
ACGCTCGACTGAATCGAATTTGCGACCGCCATGTTGTTTCAGGGAAAAAGCGAGACATTC
GAGTTAGCCGGTTCGATCCCGCCGGCATTGATCTTCCTTTTGAACTCCTTAAGAAGATAA
ACGATGCGGGAAGTCATTCTGAGGTGGGGAAGAGTAACATCCGGAACGGATCTGCTCACG
ATCCCTTGAAACCGATGACCTCCAATGATAAAGTGGAGCGAAGGAAAGAGACGAGGATCG
TACGGAAGTTGATAAGTGTCCGGAGGATGGCGAGCTTCACAAACCGCAGTCCCAAAAACT
GTTGCATTAAAACTGTCGAGATCAAGAAAGAGCAAAGCGAAACACTCGGTATTTTTATTA
AAAAACGGAAAATTTCAAGAGGGACAGATTTGTCTGTGCTTCCTGATGGTACTCGATGCA
AAGAGGGAATATTTATCAGTAGATTGGAACCCAAATGTAAAGCTGCAGTGCTGGGTCTAG
TTAACCCTGGTGATCAACTGTTGGCTATTAACACAGTTGAAGTCAGCCATCTAAGTGTGC
AGATGGTTGCTGCAATAATGGCCATTGTTCAGCACATGTCACTCACAATTAGAACGCCGC
ATTCGAACGAAAACGAATCAAAAAGAACAGCTTCCCCAAAAGTTAACAGCGAGTCGAAAT
TGAATGAAAAATTCGACGAATCCTTTCAGATTTTACTTGAGGCAATAGCTTGCCTTGATA
AACCAAATAATACAAACAACAACAGCAGCTTAAAGACACCGCCCCTACCACCAAAGTTGA
ATCCTAAAACTAAACCACAAGAAACAACGAATGAAAACGGGCAGCGTAGTTTACTGGAAG
AAATATTATCGACAGTTAAGAGCAATAGTGAGGAGGGAAGACAGTGGACTTCCTATGTTT
CCTCTCAAAATGAGGAAGACCACGCTCTTGATTTGGGGATGGCAGATACAGTTTCGTTGC
ACGAACCAGATTATGACGAAGTAGCAGATTCTGATGATGAGTCATCTTTATCCTCCAGTG
GCGTTGAAGAAGAAGTAAGCGTGGATGCTTATTCCCAACCTCTACGAGATGCATCGGGCT
CTTCGTCATCTTCCGTGAACTCATCCCTAAATGCTGAGTCAGCAGAAATATTGCTGAATC
ATCAAAACACAGCTCGACGATCGCATTCGATCGACGGCGCAAATCTCTCTGAGTTGAATC
ATAGAAATAATATTAACCACCAAGACCCAGCCTCAGGGAAATATAACATCCCACCTTTCC
CCACTCCTAACTTTGATAGAACCAGCGACACTCAACCAAAGAACACACCCAGTGTTACTG
TGGATAAGAGAAGGGAATGGCTGAATAGAGGAACCAAAGTCTCGCAAGAATTACAAAGCA
GGTTAGACGGAACATCCCAACCAACTAACAATTTAACGAAGAGAAAAAACAGTTTGGATT
TAAACTTGGAAAACCAAAAGCCATCAAATCAGAAATGGTTTCCCCGAAGCACGAGCAAGC
GAACGACCTCCGAATCCTCGAGTGGAAGCAATAGTAATGCATCAAACTCGCCCAACACAA
ATAGAACGGACCGTAAAAACTCTCTTAAAGGAATTTTAAAAGGGAGCTCGGAAAAGAACG
AAAGTTTAACAAAGATGCAAAAAAGTCCAAGTGAAAAATCTGCAAAACGACTTCTGTCAG
TTAATTCACCATCTAGCCCACTTCATAGCAAAACCAAGTTTTTTCCAACTCCTGAGCAAA
GTTCTGACGTGAAAGAGAAGTCGGTAAATCATAACAAAAACGAGGCGAGTGGAAGTAAAG
TGACGTCGCCCGGCCGGATGAGGAAGAAAAACTGGGGGATGAAGATAATGAAGCAGTTTA
AGATGATTCGAAGTTCAGACAACGCGAGTGAATACCGTTGTTGGGTTGGTGACGAACAAT
TTGACGAACAGTTTGGTCGTGGAGTAAACCCACTCATCCGTAACGTGACTCAGCATAATA
TACATAAGAATATTGACAGCAATGACTCAGCGATTCTTAACAGATATCATCTCGACATGA
GCATGGCACAACAGCGCCGCTTAAGTCGGCAACTCCTACTCGACAACACCAACACAGACC
CGTCAATCAAACCTCTAAATTTATCGCAGTTCCAAAAATACAAACCACTGCCCATGGTTA
ACACTCAGTTATCTACTGCAGTTGACGGTTGTCTAGTATTAACATTGTACGGTGTGCGGG
AGTTAAAGAAGACATTATGTGAAGCTTACTGTTTGGTGCAAGTAGATGATGCAAAGACTA
AACGGATCGGAACAACCATGCAAACTTGCAGGGGGGCTGTGGCGTGGAATCAATGTTTTG
AGATGACGGTGAACCAAGCTCGTGAGCTCCACCTAGTGTTATACACATGGGAGATGAGAG
GAGGCAAACAGAAGGTGTGTTCGCACGCCACGTTGAACCTGGCACACCTCATGCACGGCA
AGCGACCGAGAGACATGTTCTCCGAGAGGCTCGCAGTGAGGCTGGAGCCGAGGGGGACGC
TTTATATTAAGATTGGGTTGGAACACAACTCATCTAGCACTGGCCCTCTAGTGTTCGGAG
CCGATCTCCAAAGCATCGTTGATCGAGAAAATAAAAGTCTTGGAATTCCTTCGTTGGTGA
ACTCGTGTATTCATGAGGTGGAAGAACGTGGGATGCAGGTGGTTGGTGTATACAGACTGT
GTGGATCAGCCATTGTGAAGAAGAATCTACGAAGCGAACTCGAGGCCTCCAAGAATGAAG
TGAAGCTCACTGCTGAACAATATCCTGATGTTAACGTTATAACTGGTATATTAAAAGACT
TCTTGCGCGAATTGCCACAACCTCTTTTCCCACCTGAGTTACTAGAAGCAGTGACAACAG
CCATGGAGAATAATCCAGAAGAAGCGAGCGAGGAACAAAAGCTTCGGACGGACGCGCTAC
TCAAACATATACATGGTCTCTCTACTGCCCCCGCGGAGCAAGCGACGTTATACGCGCTGT
TGAATCACCTCAAACGAGTTTCAATGCACGCGCACCAGAATAAAATGACGTGTCAGAACC
TCGCCGTGTGTTTTGGCCCCGTGTTGCTTGGCCCCGTCAATGTGGGACCTACTAAAGGAT
ACCTCAACAGTATTGACTTATCAGCAGCCATTGGTTTCAAACGTCACATACAAGTGTTGA
ACTATATGCTGTCTAACTGGCCTGACACCCCTGTACTGCCACCAAGTGATATTAACGCAG
GTGACAACAAGCGTGCATCCCAGCGCATGAGTTGCGTCAGTTTAACTCGTAGATTGAGTA
GGGTCTCGGTGATGGAGGAAGATGGGGGGGAAGATGAGACGATCAGGGCGTCAAATGATC
GAGCTACACTCGTTAGTTTAGGAAGAAGTGAATCTTTGAACAGCATACTTGAGACTGAGG
ACAACTTTACTGATCCAAACATGGATTATGCAAGTAATGCAAGTAATGGCTTTGCAGATT
TTGCAGCAAGTTTGGTGTGAACTTCTATCTTTGTACAGATTACAGAACAACTTCACTTAT
TTCAAGTTATTTAGAAAATAGAGGCGTGGCGCTTCACGCAACCCATAATTTATGTAGAAC
ATCTTTTATTTTATTTGTTCCAGAGGTTTTCTTCATTAGATTTATTTGTTTTCTATGGTA
CATGGCACTTTGGCGCCCCCAATTGTACAATATCAGCATAGTGCCTAAGTCTGTTTTATT
TGATTTCTATGGTGCTTTAATTTGAAATGTGTGCCGTTATCCCATCCCACCTTTTTATTA
TACACTGCATGCTCATCACTTTTACATTTTATCTTTTCATTATTTTTGGTGCAAACTTTA
TTCTTTTTCACTTTTCTGCCAATACGTTATTTTGCCAAGGTGTTTGGCGACATCAAGTGA
ATCACAATAAGATTTCTATGTTTTCGGTACAGGATGAAATTGCAAAAACCTACTTTGCAA
AAACCTTAGATCCCATCCTTCCAAGGTCACCTCAAAGCTGTTTATCTTGCCATTAAAGTA
AGCAAGTGTCCCTGGTTGTATTGGATCTTACCTCAAAAAATAATCAAGAAATAATTTTCA
AAAATCAAACCAATTTTTGAATCACAGCAATTTTCGATTTTTGTAAAAATTTTAAAAAAT
TCTCGTAAATTCTACCTCATGTAAATAGAAGACCAAGACACAGTCATTATTACACAACAA
TACATATTGTGTTTGGTCGTAAACTGCCTGCTCAATAAATGCACGTTGTGATCACA
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[153-256] 4.53E-11 |
| ProSiteProfiles |
PDZ (IPR001478) - T[161-243] 11.662 |
| Pfam |
PDZ (IPR001478) - T[163-253] 7.8E-7 |
| SMART |
PDZ (IPR001478) - T[170-257] 1.2E-5 |
| Gene3D |
C2_domain_sf (IPR035892) - T[787-911] 2.5E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[912-1124] 4.71E-40 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[913-1110] 1.2E-49 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[917-1127] 37.512 |
| SMART |
RhoGAP_dom (IPR000198) - T[930-1124] 6.5E-47 |
| Pfam |
RhoGAP_dom (IPR000198) - T[933-1088] 6.3E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 41.322 % | 266 | 2.64E-73 |
| RHG15_HUMAN | 33.333 % | 110 | 4.08E-25 |
| SYDE1_HUMAN | 35.915 % | 223 | 6.06E-61 |
