- Transcript 'KH2012:KH.L170.69.v1...'
Transcript Model
Transcript Id
KH2012:KH.L170.69.v1.A.ND1-1
Possible name(s)
ARHGAP15; SYDE1; SYDE2
Gene model
Location
KhL170 [635,043 / 648,691]
Amino acid sequence
Length: 543
>KH.L170.69.v1.A.ND1-1
SSSDNASEYRCWVGDEQFDEQFGRGVNPLIRNVTQHNIHKNIDSNDSAILNRYHLDMSMA
QQRRLSRQLLLDNTNTDPSIKPLNLSQFQKYKPLPMVNTQLSTAVDGCLVLTLYGVRELK
KTLCEAYCLVQVDDAKTKRIGTTMQTCRGAVAWNQCFEMTVNQARELHLVLYTWEMRGGK
QKVCSHATLNLAHLMHGKRPRDMFSERLAVRLEPRGTLYIKIGLEHNSSSTGPLVFGADL
QSIVDRENKSLGIPSLVNSCIHEVEERGMQVVGVYRLCGSAIVKKNLRSELEASKNEVKL
TAEQYPDVNVITGILKDFLRELPQPLFPPELLEAVTTAMENNPEEASEEQKLRTDALLKH
IHGLSTAPAEQATLYALLNHLKRVSMHAHQNKMTCQNLAVCFGPVLLGPVNVGPTKGYLN
SIDLSAAIGFKRHIQVLNYMLSNWPDTPVLPPSDINAGDNKRASQRMSCVSLTRRLSRVS
VMEEDGGEDETIRASNDRATLVSLGRSESLNSILETEDNFTDPNMDYASNASNGFADFAA
SLV
Nucleotide sequence
Length: 2,388
>KH2012:KH.L170.69.v1.A.ND1-1
AGCAGTTCAGACAACGCGAGTGAATACCGTTGTTGGGTTGGTGACGAACAATTTGACGAA
CAGTTTGGTCGTGGAGTAAACCCACTCATCCGTAACGTGACTCAGCATAATATACATAAG
AATATTGACAGCAATGACTCAGCGATTCTTAACAGATATCATCTCGACATGAGCATGGCA
CAACAGCGCCGCTTAAGTCGGCAACTCCTACTCGACAACACCAACACAGACCCGTCAATC
AAACCTCTAAATTTATCGCAGTTCCAAAAATACAAACCACTGCCCATGGTTAACACTCAG
TTATCTACTGCAGTTGACGGTTGTCTAGTATTAACATTGTACGGTGTGCGGGAGTTAAAG
AAGACATTATGTGAAGCTTACTGTTTGGTGCAAGTAGATGATGCAAAGACTAAACGGATC
GGAACAACCATGCAAACTTGCAGGGGGGCTGTGGCGTGGAATCAATGTTTTGAGATGACG
GTGAACCAAGCTCGTGAGCTCCACCTAGTGTTATACACATGGGAGATGAGAGGAGGCAAA
CAGAAGGTGTGTTCGCACGCCACGTTGAACCTGGCACACCTCATGCACGGCAAGCGACCG
AGAGACATGTTCTCCGAGAGGCTCGCAGTGAGGCTGGAGCCGAGGGGGACGCTTTATATT
AAGATTGGGTTGGAACACAACTCATCTAGCACTGGCCCTCTAGTGTTCGGAGCCGATCTC
CAAAGCATCGTTGATCGAGAAAATAAAAGTCTTGGAATTCCTTCGTTGGTGAACTCGTGT
ATTCATGAGGTGGAAGAACGTGGGATGCAGGTGGTTGGTGTATACAGACTGTGTGGATCA
GCCATTGTGAAGAAGAATCTACGAAGCGAACTCGAGGCCTCCAAGAATGAAGTGAAGCTC
ACTGCTGAACAATATCCTGATGTTAACGTTATAACTGGTATATTAAAAGACTTCTTGCGC
GAATTGCCACAACCTCTTTTCCCACCTGAGTTACTAGAAGCAGTGACAACAGCCATGGAG
AATAATCCAGAAGAAGCGAGCGAGGAACAAAAGCTTCGGACGGACGCGCTACTCAAACAT
ATACATGGTCTCTCTACTGCCCCCGCGGAGCAAGCGACGTTATACGCGCTGTTGAATCAC
CTCAAACGAGTTTCAATGCACGCGCACCAGAATAAAATGACGTGTCAGAACCTCGCCGTG
TGTTTTGGCCCCGTGTTGCTTGGCCCCGTCAATGTGGGACCTACTAAAGGATACCTCAAC
AGTATTGACTTATCAGCAGCCATTGGTTTCAAACGTCACATACAAGTGTTGAACTATATG
CTGTCTAACTGGCCTGACACCCCTGTACTGCCACCAAGTGATATTAACGCAGGTGACAAC
AAGCGTGCATCCCAGCGCATGAGTTGCGTCAGTTTAACTCGTAGATTGAGTAGGGTCTCG
GTGATGGAGGAAGATGGGGGGGAAGATGAGACGATCAGGGCGTCAAATGATCGAGCTACA
CTCGTTAGTTTAGGAAGAAGTGAATCTTTGAACAGCATACTTGAGACTGAGGACAACTTT
ACTGATCCAAACATGGATTATGCAAGTAATGCAAGTAATGGCTTTGCAGATTTTGCAGCA
AGTTTGGTGTGAACTTCTATCTTTGTACAGATTACAGAACAACTTCACTTATTTCAAGTT
ATTTAGAAAATAGAGGCGTGGCGCTTCACGCAACCCATAATTTATGTAGAACATCTTTTA
TTTTATTTGTTCCAGAGGTTTTCTTCATTAGATTTATTTGTTTTCTATGGTACATGGCAC
TTTGGCGCCCCCAATTGTACAATATCAGCATAGTGCCTAAGTCTGTTTTATTTGATTTCT
ATGGTGCTTTAATTTGAAATGTGTGCCGTTATCCCATCCCACCTTTTTATTATACACTGC
ATGCTCATCACTTTTACATTTTATCTTTTCATTATTTTTGGTGCAAACTTTATTCTTTTT
CACTTTTCTGCCAATACGTTATTTTGCCAAGGTGTTTGGCGACATCAAGTGAATCACAAT
AAGATTTCTATGTTTTCGGTACAGGATGAAATTGCAAAAACCTACTTTGCAAAAACCTTA
GATCCCATCCTTCCAAGGTCACCTCAAAGCTGTTTATCTTGCCATTAAAGTAAGCAAGTG
TCCCTGGTTGTATTGGATCTTACCTCAAAAAATAATCAAGAAATAATTTTCAAAAATCAA
ACCAATTTTTGAATCACAGCAATTTTCGATTTTTGTAAAAATTTTAAAAAATTCTCGTAA
ATTCTACCTCATGTAAATAGAAGACCAAGACACAGTCATTATTACACAACAATACATATT
GTGTTTGGTCGTAAACTGCCTGCTCAATAAATGCACGTTGTGATCACA
| Gene3D |
C2_domain_sf (IPR035892) - T[108-232] 7.5E-10 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[233-445] 1.06E-40 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[234-434] 3.0E-50 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[238-448] 37.512 |
| SMART |
RhoGAP_dom (IPR000198) - T[251-445] 6.5E-47 |
| Pfam |
RhoGAP_dom (IPR000198) - T[254-409] 1.7E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 40.984 % | 260 | 7.49E-76 |
| RHG15_HUMAN | 33.333 % | 109 | 1.47E-25 |
| SYDE1_HUMAN | 36.131 % | 219 | 4.59E-63 |
