Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 692

>KH.L166.1.v1.A.ND2-1
TLQTNKASHGTGKRNRIFHGRFVTLGKVISRSTENVAMPDEDGLSGASSVESLASNASLP
SCMNGAVGGNFDHGYQRSSLRASQSSEAVEAAGRISHWAVSFERLLEDPLGVIYFKEFLR
KEFSEENILFWEASDKLRRTPSCDSASLRQQIQDIYDRFLSPTAVMPVNIDSHGQQLAEE
ALTIEPHPDIFINQQNQVYTLMKLDSYSRFLKSTLYRQCMVAEMEGRTLPLDVGEDGGSD
VASFDGSSLSRPASRSLDAGTLRRKGDMVCWLLCYTSGSQTGIHGPTNSFRWSIQQFLKG
HCSLPLHSITPDFPDSSRVCHVTLWDGSTTVLYAKKPGSTTIEEVIGNMSERRGVRLRAL
DVFLVEDGDDGRKRRPMMLDLDVSVLAGQSIVLERRSLFRLDMPPVQRSVGVKARPTKPI
DEVLRPVLQKYNLHLEDMEARNSADNVGLNLKNPVSTLDGMRIVVDNKKGELGKEKVTRN
QPQKSYKSTIPDKQETEELISLMSSLQSSTMHDQRGLISKAHLELPEFLKLKPTPPSDEK
NVNANNNVMSSMTSSGVTSSTEPSPYAVSYISDINTQHRSKPVKQEKGYVELNARPKLMS
TFKPSNPAPPPNMGSKPPIPPHPQFLSRGSTPSPVDDLNDTTIVEDPDQVNFDPELTLLP
SPTHKRELQTPDYTPPPPVGFRNEKDESTIMV

Nucleotide sequence

Length: 2,138

>KH2012:KH.L166.1.v1.A.ND2-1
AAACATTGCAGACGAATAAAGCTTCGCACGGCACAGGAAAACGTAACCGAATCTTTCACG
GTCGATTTGTGACGTTGGGTAAAGTTATCAGCCGTTCAACTGAGAATGTTGCGATGCCAG
ATGAGGATGGACTCAGTGGCGCCTCTAGTGTTGAGAGTCTGGCAAGCAACGCCAGCTTGC
CGAGCTGTATGAACGGAGCGGTCGGTGGAAACTTTGACCATGGGTACCAAAGATCATCTC
TAAGAGCTTCCCAATCATCGGAGGCAGTAGAAGCTGCGGGGAGGATCTCGCATTGGGCTG
TTTCGTTTGAAAGGCTGCTGGAAGACCCCCTTGGTGTCATCTATTTTAAGGAGTTTCTTC
GAAAAGAATTTTCTGAGGAAAATATTTTGTTTTGGGAGGCAAGTGACAAATTACGACGAA
CCCCATCGTGTGATTCTGCGTCGCTACGACAACAAATACAAGATATCTATGACAGGTTCC
TATCCCCCACTGCAGTGATGCCAGTCAATATCGACAGCCATGGACAACAACTGGCAGAGG
AAGCACTGACAATTGAACCGCATCCGGACATTTTCATTAACCAGCAAAATCAGGTCTACA
CCCTGATGAAGTTGGACAGCTACAGCAGGTTCCTCAAGTCAACATTATACCGACAATGCA
TGGTAGCTGAGATGGAGGGAAGAACTCTTCCCTTGGATGTGGGGGAGGATGGAGGATCAG
ATGTTGCAAGCTTTGATGGGAGTTCGCTATCAAGGCCCGCATCAAGGAGTTTGGATGCGG
GGACTCTAAGGAGGAAAGGGGACATGGTATGTTGGTTGTTGTGTTATACCAGCGGTTCCC
AAACTGGGATCCACGGACCAACTAACAGTTTCAGATGGTCCATACAGCAGTTTTTAAAGG
GTCACTGCTCCCTCCCCTTGCATTCAATCACTCCTGATTTCCCCGATAGTTCTCGTGTTT
GCCATGTCACTTTATGGGACGGATCAACCACTGTATTGTATGCTAAAAAACCTGGAAGCA
CCACCATTGAAGAAGTTATAGGGAATATGTCAGAGAGAAGAGGAGTTAGGTTGAGAGCGC
TGGATGTCTTCCTCGTGGAAGATGGAGATGATGGGAGGAAGAGGAGGCCGATGATGTTGG
ACCTTGATGTATCAGTCTTGGCCGGTCAATCAATCGTCTTAGAGCGTCGTTCATTGTTCC
GTCTCGATATGCCCCCAGTACAAAGGTCGGTTGGTGTGAAAGCGAGGCCAACCAAACCCA
TTGATGAAGTGTTAAGGCCAGTGTTGCAGAAATATAACTTACATTTAGAAGACATGGAAG
CAAGAAATAGCGCCGACAATGTTGGGTTAAATTTGAAAAATCCAGTTTCCACATTGGATG
GAATGAGGATTGTTGTTGATAATAAGAAAGGTGAGTTGGGGAAGGAAAAGGTAACCAGAA
ATCAGCCACAGAAATCTTATAAATCTACTATTCCTGATAAACAAGAAACTGAAGAACTGA
TCAGTTTAATGTCTTCATTACAAAGCAGCACGATGCACGACCAGCGCGGTTTAATCTCCA
AAGCTCATCTTGAACTACCCGAGTTTTTAAAACTTAAACCAACCCCACCTAGTGACGAGA
AGAACGTTAACGCGAACAACAACGTGATGTCATCAATGACATCATCAGGTGTGACATCAT
CAACCGAACCCTCACCATATGCAGTGTCGTACATATCCGATATAAACACACAACATCGGT
CGAAACCAGTGAAGCAAGAGAAAGGCTACGTTGAGTTAAACGCACGACCAAAATTAATGT
CAACTTTTAAACCCTCCAACCCAGCCCCCCCACCAAATATGGGCTCAAAGCCCCCAATAC
CACCCCACCCCCAGTTTTTGAGCCGAGGTTCGACCCCGAGCCCCGTTGACGATTTAAACG
ACACAACTATAGTTGAAGATCCCGACCAAGTGAACTTTGACCCAGAGTTGACCCTTCTTC
CCTCCCCAACGCATAAGCGGGAATTACAAACGCCTGACTACACTCCCCCACCCCCCGTAG
GATTCCGGAACGAAAAAGATGAATCAACAATAATGGTTTAACAACAGCATTGTGACGTAA
CAATATTCCTGTTTGCCAATAGAAGCAAAAGAAAGAAA

InterProScan

PANTHER	Loco (IPR034484) - T[25-71] 1.4E-125 - T[80-567] 1.4E-125
Gene3D	RGS_subdom1/3 (IPR024066) - T[94-122] 9.0E-50 - T[206-230] 9.0E-50
SUPERFAMILY	RGS_sf (IPR036305) - T[94-219] 7.85E-36
PRINTS	RGS (IPR016137) - T[98-119] 1.8E-26 - T[120-138] 1.8E-26 - T[151-174] 1.8E-26 - T[194-213] 1.8E-26
SMART	RGS (IPR016137) - T[101-220] 3.0E-37
Pfam	RGS (IPR016137) - T[101-218] 6.6E-27
ProSiteProfiles	RGS (IPR016137) - T[101-220] 31.093
SMART	RBD_dom (IPR003116) - T[318-396] 0.18 - T[397-468] 2.2E-6
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[382-477] 8.27E-23
ProSiteProfiles	RBD_dom (IPR003116) - T[398-468] 15.855
Pfam	RBD_dom (IPR003116) - T[405-466] 5.8E-7
ProSiteProfiles	GoLoco_motif (IPR003109) - T[496-518] 8.277