- Transcript 'KH2012:KH.S404.1.v2....' >
- Transcript 'KH2012:KH.S404.1.v3....' >
- Transcript 'KH2012:KH.L154.44.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.44.v1.A.SL4-1
Possible name(s)
C6; C8B; C9
Gene model
Location
KhL154 [304,234 / 309,068]
Amino acid sequence
Length: 575
>KH.L154.44.v1.A.SL4-1
LHCSVGMRLLFAVIAVLASVLLFCESGEAWWWSRRRAVSCKVSSWGPWAKCSKTCGGGKA
IRSRYIKRNSAHGGTRCPTLHQTRPCYTQRCPWPITCKWSAWTAWSSCDPCFPGARSKFR
TITTPAMFNGAECTGSRALTDFSCTIKKACITKTCPATKFSCLDGLGCISKKLRCNGDND
CADRSDEKSCSKGTIHLPCGNKKYKGIPNIDIAGAGFDLIKGVAEGKILDNQKYDGRCST
VKSGDIGERFRKPANVQFYRFQARTHSSFYVKSYQSAKAYMKDLRASTARKLSAGVSYTD
PSLVSVSMKVGNSNSRKSRLAVTFGTNFDSKFFTVYSTVQVAQFRMVRHNLLLSYEFRRR
LKQLPDDFDYTKYAQIISDFGTHFYSWGVLGGRYEYVYRYSKRDLRRSRLTDHQQKSCLS
TEAGISFLGSGGSIGSSNCKTNGLSKKHGGSFTRSATNAISNVIGGKSDKAASLSFFSGK
TPNKSNYNEWVKTVKHHPAIIDYKLSPISSAVPLSMLAIRKNLERALVLYLKEYDYSKCK
GKCAHGATVVVKDKGKLCQCLCPANYGGIDCHVRA
Nucleotide sequence
Length: 1,869
>KH2012:KH.L154.44.v1.A.SL4-1
TGATTGCACTGTTCAGTAGGCATGCGATTGTTGTTTGCAGTGATTGCTGTTTTAGCATCA
GTATTGCTGTTCTGTGAGAGTGGAGAAGCATGGTGGTGGAGTAGAAGAAGGGCTGTATCT
TGCAAAGTATCTAGTTGGGGTCCTTGGGCTAAATGTTCCAAGACATGTGGTGGGGGGAAA
GCAATTAGATCAAGGTACATTAAACGAAACTCAGCTCATGGTGGCACTAGGTGTCCTACT
CTACATCAAACAAGACCTTGCTATACTCAAAGGTGTCCATGGCCCATTACATGTAAATGG
AGTGCATGGACTGCATGGTCAAGCTGTGATCCTTGTTTTCCAGGAGCAAGGAGCAAATTC
CGAACTATTACAACACCAGCAATGTTCAATGGGGCAGAGTGTACTGGATCTAGAGCTCTT
ACAGATTTTTCCTGTACAATAAAAAAGGCTTGCATAACAAAAACTTGTCCAGCTACCAAG
TTTTCTTGCCTTGATGGTCTTGGTTGTATTTCTAAAAAACTTCGCTGCAATGGTGACAAT
GACTGCGCTGACCGCTCCGATGAAAAAAGCTGTTCTAAGGGCACCATTCATTTACCTTGT
GGAAACAAAAAATACAAAGGCATTCCAAACATTGATATCGCTGGAGCTGGGTTCGACCTC
ATAAAAGGGGTAGCAGAAGGCAAAATCTTGGATAATCAAAAATATGATGGACGATGCTCA
ACCGTGAAAAGTGGTGACATAGGAGAACGCTTTAGAAAACCAGCAAATGTTCAATTTTAT
CGGTTTCAGGCACGAACACATTCATCCTTTTACGTAAAGTCCTATCAATCAGCAAAGGCC
TACATGAAAGATTTACGAGCATCCACTGCACGTAAACTTAGCGCTGGTGTCTCATACACA
GATCCATCTCTAGTTAGTGTATCCATGAAGGTTGGTAACTCCAACAGTCGCAAGTCAAGA
TTAGCGGTTACTTTTGGAACAAACTTTGATTCCAAGTTTTTTACAGTATATAGCACTGTA
CAAGTTGCACAATTTAGAATGGTTCGTCATAATCTTCTCCTTTCATACGAGTTCCGACGA
CGATTGAAGCAACTGCCAGATGATTTTGATTACACGAAATATGCTCAAATAATTTCTGAC
TTTGGCACCCATTTCTACTCATGGGGCGTTCTGGGTGGTAGGTATGAGTATGTGTACCGG
TATTCCAAGAGAGATCTACGTAGGTCAAGACTCACAGACCATCAGCAAAAATCTTGTTTG
TCAACTGAAGCTGGCATATCTTTTCTCGGCTCTGGCGGCAGTATTGGTTCATCCAACTGT
AAAACAAATGGGCTGTCAAAAAAACATGGAGGAAGTTTCACTCGATCTGCTACCAATGCT
ATTTCTAATGTGATTGGTGGTAAATCCGACAAAGCGGCTTCTCTAAGTTTTTTTTCTGGA
AAAACACCGAACAAGTCAAATTATAATGAATGGGTTAAGACAGTTAAACACCATCCTGCA
ATAATTGATTATAAGCTCTCTCCAATATCATCAGCTGTACCACTTTCAATGTTGGCGATT
AGAAAAAACTTAGAACGTGCTTTGGTTCTCTATTTGAAGGAGTATGACTACTCCAAGTGT
AAGGGTAAATGTGCCCATGGTGCAACAGTGGTCGTGAAGGATAAAGGAAAGCTCTGCCAG
TGTCTTTGCCCTGCCAACTATGGTGGCATTGATTGCCATGTTCGTGCATAAAGCAATGTT
TTTATTGTTATATTTTTGTTCATTAAGTGGTGAAAGAAAAAAATGCATTAATCAGAAAGT
ATTTATTGCAATCATTTGCTTCGGGATTATAACATTAACAAGAAATAAATATACCAACAA
AATAATATA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[38-86] 9.2E-14 - T[96-144] 3.6E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[38-88] 2.88E-11 - T[96-136] 3.14E-6 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[39-92] 12.395 - T[96-156] 9.389 |
| SMART |
TSP1_rpt (IPR000884) - T[42-92] 1.2E-13 - T[99-156] 2.2E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[43-91] 1.1E-10 - T[100-150] 0.0058 |
| PRINTS |
MAC_perforin (IPR001862) - T[117-133] 6.3E-22 - T[161-181] 6.3E-22 - T[362-384] 6.3E-22 - T[489-508] 6.3E-22 - T[540-560] 6.3E-22 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[149-190] 1.57E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[153-190] 1.4E-11 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[154-192] 1.4E-12 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[154-191] 12.413 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[155-190] 3.4759E-10 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[168-190] . |
| ProSiteProfiles |
MACPF (IPR020864) - T[195-538] 30.482 |
| Pfam |
MACPF (IPR020864) - T[329-530] 3.5E-37 |
| SMART |
MACPF (IPR020864) - T[331-532] 3.2E-31 |
| ProSitePatterns |
MACPF_CS (IPR020863) - T[373-384] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[560-571] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO6_HUMAN | 31.876 % | 268 | 2.7E-79 |
| CO8B_HUMAN | 27.846 % | 212 | 2.74E-61 |
| CO9_HUMAN | 26.99 % | 199 | 1.59E-56 |