- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R48....' >
- Region 'REG00000862' >
- Transcript 'Cisavi.CG.ENS81.R11....' >
- Transcript 'KH2012:KH.L154.31.v3...'
Transcript Model
Transcript Id
KH2012:KH.L154.31.v3.A.ND3-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [179,747 / 183,530]
Amino acid sequence
Length: 502
>KH.L154.31.v3.A.ND3-1
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRILDNGSGMCRAGFAGDDAPRAVFPTIVGRPHRQGVVVDKGYKDTYFGDEA
QSKRDSLFLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAVEEHPVFFTEAPLNPKINREK
MTQIMFETFNTSAMYVAIQAELSLYASGRTTGIVFGSGDGVSHTVPIYEGYALPHATRRL
DLAGRDLTGYLMGILTEIGYYFTTTAEREIVRDIKEKLCYVALDFEKEMQIAASSSSLEN
SYELPDGQVITIGNERFRCPEALFQPALLGMEYAGIHETTYNSIMKCDVDIRKDLYANTV
LSGGSTMFPAIVDRMQKEITGLAPPTMKIKIIAPPEREYSVWIGGSILASLSTFQQMWIS
KQEYDESGSSIVYRKCFSMQYS
Nucleotide sequence
Length: 1,831
>KH2012:KH.L154.31.v3.A.ND3-1
ATGGCTCGTACCAAGCAAACTGCTCGAAAGTCTACTGGAGGAAAAGCTCCACGTAAACAA
CTTGCCACCAAAGCTGCAAGAAAGAGCGCTCCTGCTACAGGAGGCGTCAAGAAGCCTCAT
CGTTACCGACCAGGTACAGTAGCTCTGCGAGAAATCCGTCGATATCAGAAGTCGACTGAG
CTGCTGATCCGCAAGTTGCCTTTCCAGCGTCTTGTTCGTGAAATCGCCCAAGATTTCAAG
ACCGATCTTCGATTCCAGAGCAGTGCAGTAATGGCGTTGCAAGAAGCGAGCGAAGCTTAC
TTGGTCGGTCTTTTTGAAGACACGAATCTTTGCGCCATCCACGCAAAGCGAGTCACCATC
ATGCCCAAGGATATTCAACTTGCACGACGCATTCTCGACAATGGATCCGGTATGTGCAGG
GCCGGTTTCGCCGGAGACGACGCACCACGTGCCGTCTTCCCAACCATCGTAGGACGACCC
CATCGCCAGGGCGTCGTAGTTGATAAGGGATACAAAGACACTTACTTCGGAGACGAAGCC
CAGAGCAAAAGAGATAGCCTTTTTTTAAAATACCCAATTGAGCACGGTATCGTAACCAAC
TGGGACGACATGGAAAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGTCGCAGTA
GAAGAGCACCCAGTTTTCTTTACTGAGGCCCCACTTAACCCAAAAATTAACCGTGAAAAG
ATGACCCAAATTATGTTCGAAACCTTTAACACCTCCGCTATGTACGTCGCCATCCAGGCT
GAGCTTTCATTGTACGCTTCTGGTCGTACCACCGGTATCGTGTTCGGCAGTGGTGATGGT
GTTTCCCACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCCACCCGTCGTCTC
GATTTGGCCGGACGAGATCTTACCGGTTATTTAATGGGGATCTTGACCGAGATAGGTTAT
TACTTCACCACAACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAAAAACTTTGCTAT
GTTGCTCTTGACTTCGAGAAAGAAATGCAAATCGCTGCCAGCAGCAGCTCACTCGAAAAT
AGCTACGAACTTCCTGACGGACAGGTTATTACCATTGGCAATGAGCGATTCCGTTGCCCA
GAGGCCCTCTTCCAACCAGCCCTCCTTGGTATGGAATATGCTGGTATCCACGAGACCACC
TACAACTCCATTATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAACACAGTT
CTCTCTGGAGGTTCCACTATGTTCCCTGCAATCGTCGACAGAATGCAAAAGGAGATTACT
GGTCTTGCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGGAATACTCT
GTCTGGATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCAGC
AAACAAGAATACGACGAGTCTGGCTCTTCTATTGTCTACCGCAAATGCTTCTCAATGCAA
TATTCGTAACCTTCAAAACTATATTATATCGATTAGCTGTTGTATAAAAACGTTATCTAA
TATTTGCACTTGGTCTTCAAAATTCATGATCTTGCTCCAGTATTGAATTCTTCGTGTGAA
TTACCCTGACACAGCAATGCCACCGTAAACATGGTGTGTTTGATACAACTGATATTATGT
GAATACTTACACTCTGTAGACCTTTATATTATTTTAAGCTGTGAAATGAATGCGTTTTGT
CGAAAACTTATTTGACGAACTAAACGGATCATAGGCTTTATTCAACTTAAAACGAACGTC
TCAATAAAACACAATAGTAAAACTAATACAA
| Pfam |
Histone_H2A/H2B/H3 (IPR007125) - T[1-131] 2.7E-52 |
| Gene3D |
Histone-fold (IPR009072) - T[2-133] 1.6E-76 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[2-134] 6.71E-56 |
| PRINTS |
Histone_H3/CENP-A (IPR000164) - T[3-17] 3.4E-79 - T[17-31] 3.4E-79 - T[34-55] 3.4E-79 - T[58-75] 3.4E-79 - T[80-98] 3.4E-79 - T[98-114] 3.4E-79 - T[114-135] 3.4E-79 |
| ProSitePatterns |
Histone_H3/CENP-A (IPR000164) - T[15-21] . - T[67-75] . |
| SMART |
Histone_H3/CENP-A (IPR000164) - T[34-136] 1.1E-70 |
| PANTHER |
Actin (IPR004000) - T[111-496] 1.1E-236 |
| Pfam |
Actin (IPR004000) - T[131-497] 8.3E-135 |
| SMART |
Actin (IPR004000) - T[131-497] 2.2E-208 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[478-486] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 86.022 % | 674 | 0 |
| ACTB_HUMAN | 85.829 % | 674 | 0 |
| ACTA_HUMAN | 84.196 % | 657 | 0 |