- Transcript 'KH2012:KH.L149.21.v2...' >
- Molecular Tool 'Ci-bmp::Ci-Tbx6b' >
- Transcript 'KH2012:KH.C1.26.v6.A...' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'KH2012:KH.L154.31.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.31.v1.R.ND1-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhL154 [181,574 / 183,530]
Amino acid sequence
Length: 380
>KH.L154.31.v1.R.ND1-1
MNNDVAALVVDNGSGMCRAGFAGDDAPRAVFPTIVGRPHRQGVVVDKGYKDTYFGDEAQS
KRDSLFLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAVEEHPVFFTEAPLNPKINREKMT
QIMFETFNTSAMYVAIQAELSLYASGRTTGIVFGSGDGVSHTVPIYEGYALPHATRRLDL
AGRDLTGYLMGILTEIGYYFTTTAEREIVRDIKEKLCYVALDFEKEMQIAASSSSLENSY
ELPDGQVITIGNERFRCPEALFQPALLGMEYAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMFPAIVDRMQKEITGLAPPTMKIKIIAPPEREYSVWIGGSILASLSTFQQMWISKQ
EYDESGSSIVYRKCFSMQYS
Nucleotide sequence
Length: 1,465
>KH2012:KH.L154.31.v1.R.ND1-1
ATGAACAATGATGTTGCTGCACTCGTAGTCGACAATGGATCCGGTATGTGCAGGGCCGGT
TTCGCCGGAGACGACGCACCACGTGCCGTCTTCCCAACCATCGTAGGACGACCCCATCGC
CAGGGCGTCGTAGTTGATAAGGGATACAAAGACACTTACTTCGGAGACGAAGCCCAGAGC
AAAAGAGATAGCCTTTTTTTAAAATACCCAATTGAGCACGGTATCGTAACCAACTGGGAC
GACATGGAAAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGTCGCAGTAGAAGAG
CACCCAGTTTTCTTTACTGAGGCCCCACTTAACCCAAAAATTAACCGTGAAAAGATGACC
CAAATTATGTTCGAAACCTTTAACACCTCCGCTATGTACGTCGCCATCCAGGCTGAGCTT
TCATTGTACGCTTCTGGTCGTACCACCGGTATCGTGTTCGGCAGTGGTGATGGTGTTTCC
CACACCGTCCCAATCTACGAGGGTTACGCCCTTCCCCACGCCACCCGTCGTCTCGATTTG
GCCGGACGAGATCTTACCGGTTATTTAATGGGGATCTTGACCGAGATAGGTTATTACTTC
ACCACAACTGCCGAGCGTGAAATCGTTCGTGACATCAAGGAAAAACTTTGCTATGTTGCT
CTTGACTTCGAGAAAGAAATGCAAATCGCTGCCAGCAGCAGCTCACTCGAAAATAGCTAC
GAACTTCCTGACGGACAGGTTATTACCATTGGCAATGAGCGATTCCGTTGCCCAGAGGCC
CTCTTCCAACCAGCCCTCCTTGGTATGGAATATGCTGGTATCCACGAGACCACCTACAAC
TCCATTATGAAGTGCGATGTTGACATCCGTAAGGACTTGTACGCCAACACAGTTCTCTCT
GGAGGTTCCACTATGTTCCCTGCAATCGTCGACAGAATGCAAAAGGAGATTACTGGTCTT
GCACCACCAACCATGAAGATTAAGATCATTGCCCCACCAGAGAGGGAATACTCTGTCTGG
ATTGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCAGCAAACAA
GAATACGACGAGTCTGGCTCTTCTATTGTCTACCGCAAATGCTTCTCAATGCAATATTCG
TAACCTTCAAAACTATATTATATCGATTAGCTGTTGTATAAAAACGTTATCTAATATTTG
CACTTGGTCTTCAAAATTCATGATCTTGCTCCAGTATTGAATTCTTCGTGTGAATTACCC
TGACACAGCAATGCCACCGTAAACATGGTGTGTTTGATACAACTGATATTATGTGAATAC
TTACACTCTGTAGACCTTTATATTATTTTAAGCTGTGAAATGAATGCGTTTTGTCGAAAA
CTTATTTGACGAACTAAACGGATCATAGGCTTTATTCAACTTAAAACGAACGTCTCAATA
AAACACAATAGTAAAACTAATACAA
| PANTHER |
Actin (IPR004000) - T[1-374] 1.5E-239 |
| Pfam |
Actin (IPR004000) - T[4-375] 3.7E-137 |
| SMART |
Actin (IPR004000) - T[5-375] 6.9E-213 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.3E-50 - T[49-60] 1.3E-50 - T[61-83] 1.3E-50 - T[115-128] 1.3E-50 - T[140-159] 1.3E-50 - T[236-252] 1.3E-50 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[356-364] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 86.4 % | 679 | 0 |
| ACTB_HUMAN | 86.933 % | 683 | 0 |
| ACTA_HUMAN | 84.14 % | 660 | 0 |