- Transcript 'KH2012:KH.L154.23.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.23.v1.A.SL1-1
Possible name(s)
NPAS1; NPAS3; SIM2
Gene model
Location
KhL154 [58,740 / 73,813]
Amino acid sequence
Length: 780
>KH.L154.23.v1.A.SL1-1
CHVDYGGAIIKSPTYCKSMQCHNAGPTVLSLNASVLKYLSSKQKFFEQLEMLKNQQIKND
AAESKAGEELYQTQEKSNVRLTCVKKEKSRDAARSRRGKENFEFYELAKLLPVPSETSSQ
LDKASIVRLTMSYLQLQKFMLARKSTEPASKPVTTVKPNPDYFCRAAQQSSFMENCMGSF
ILQSLDGFIFVLNKDGRFLFVSDTVSIYLGLAQVDLIGTSIFNYTHPADHPELVDHLKNR
SNSHHNITRNFHSSDKNEELEADTSSCSFFIRMKSTLTRRGSNVKSIGYKVVHMTGCLSS
KIHRRLKVENASSDDETPTNLDAMLGLTGIAQVLPPPTLIDIKLDQPMFVVRIDASLRVN
YCEDRIEQLTDYTMDQVKGRTLYHFIHSSDLTKIRRCHAAILAKGQVVTPYYRWLLKSGK
HLWLQSCVTIVVDKHLSSDDDMFIWISYVLGSEDISCATSNSTTTKNLCKTKLVNGILEK
LEDTSMIDRKLKKVHSLPTRMYRSESSEKLNNEPTNLCINRANSTKRSSSVSDDLECKKQ
KPSLKSMIPEPTEAKPLKLTKHDDSLDSSSKLWYNPPNREITDHSDLPPGVKVGHPGGTL
MTVQPSPTVVRHHYPFGIDPNLLNSNPLLAKMLTAGCAGYDSLFSQSDALIFAAPSMSFL
TPVLAPVPHLVPTTNICPSSVATIIEELRKDPLRKKSPPNKVVLPNNTQVKNSPKENESI
ASSAGCSQTSRTSSLQNTVLSLPNNTVFLSPIPGYQHHTTNPLLLGSIKFPQQINALNSL
Nucleotide sequence
Length: 5,076
>KH2012:KH.L154.23.v1.A.SL1-1
AAAGTGTAACAATATACTACAGCGTGATTTCAAATCTGGTGCTTTTGCATCGGCAATTTC
TGATGCCATGTAGACTATGGAGGTGCTATCATAAAATCACCCACATACTGCAAGTCAATG
CAGTGCCACAACGCTGGCCCTACGGTGCTAAGCTTAAATGCAAGCGTGCTAAAATATCTG
AGTTCAAAGCAAAAGTTTTTCGAACAACTGGAAATGCTTAAAAATCAGCAGATTAAAAAT
GATGCAGCTGAGTCAAAGGCTGGGGAAGAACTGTATCAAACGCAGGAGAAATCTAATGTT
CGACTCACATGCGTGAAGAAGGAGAAGTCCCGTGATGCTGCACGCTCTCGAAGAGGAAAA
GAAAATTTTGAGTTTTATGAGCTTGCCAAACTACTTCCAGTACCTTCCGAAACCTCAAGT
CAGCTCGACAAAGCATCTATTGTTCGTCTCACAATGAGTTATCTTCAACTGCAGAAGTTC
ATGTTGGCTCGGAAGTCCACTGAGCCTGCTAGCAAACCTGTAACCACAGTCAAGCCAAAT
CCAGATTACTTTTGTCGTGCCGCTCAACAATCTTCATTCATGGAAAACTGCATGGGAAGC
TTCATACTGCAAAGCCTTGATGGTTTCATATTCGTGCTGAACAAAGACGGAAGGTTTTTA
TTCGTGTCTGACACTGTATCTATATACTTAGGCCTTGCACAGGTTGACTTGATAGGAACA
AGCATATTCAACTACACCCACCCTGCAGATCATCCTGAACTTGTAGACCACCTAAAGAAC
AGATCAAACAGCCACCATAACATAACACGCAATTTCCACTCTTCTGATAAAAATGAAGAG
TTGGAAGCGGATACATCATCTTGTTCATTTTTCATACGAATGAAATCCACGCTTACAAGA
AGAGGAAGTAATGTGAAATCAATCGGCTACAAGGTTGTTCATATGACTGGTTGTCTCAGC
AGCAAAATACACCGCCGTCTTAAAGTCGAAAACGCTTCAAGCGATGACGAGACCCCAACC
AATCTTGATGCAATGCTGGGGCTAACGGGGATCGCCCAGGTGCTTCCTCCTCCCACGCTT
ATTGATATAAAATTAGACCAACCGATGTTCGTCGTAAGAATCGACGCTTCACTGCGTGTC
AACTACTGCGAAGACAGAATTGAGCAACTGACAGATTACACAATGGACCAAGTAAAAGGA
CGAACATTATATCACTTCATTCATTCAAGTGATCTTACAAAGATAAGAAGATGTCATGCT
GCAATTCTTGCAAAAGGCCAAGTAGTGACACCGTATTATCGGTGGCTGCTGAAATCTGGT
AAACATCTCTGGTTGCAGTCATGCGTTACGATAGTGGTCGACAAACATCTTTCTTCAGAT
GATGATATGTTTATTTGGATAAGCTATGTTCTTGGCAGTGAAGATATATCGTGTGCAACC
TCTAACTCAACAACAACAAAAAATCTTTGTAAAACGAAGCTTGTAAATGGGATTTTGGAA
AAACTGGAAGATACTTCTATGATTGACAGGAAGCTAAAAAAGGTCCATTCACTTCCAACC
AGAATGTACAGAAGTGAATCTAGTGAGAAATTAAATAACGAACCAACCAATCTGTGCATT
AACAGAGCAAATTCTACAAAGAGAAGTTCCAGTGTCTCAGATGATTTGGAATGCAAGAAA
CAAAAACCTTCACTCAAATCCATGATCCCTGAACCCACTGAAGCGAAACCATTAAAATTA
ACGAAGCATGACGACTCCCTTGACTCAAGCTCGAAGCTCTGGTACAATCCACCCAACCGT
GAAATAACTGACCACAGCGATTTACCCCCTGGGGTAAAAGTGGGTCACCCGGGAGGTACC
CTAATGACAGTACAGCCCAGCCCCACAGTAGTCCGACACCATTACCCATTTGGAATTGAC
CCAAACTTGCTGAACTCTAACCCGCTGCTCGCGAAAATGCTCACAGCAGGTTGTGCTGGT
TACGACTCATTATTCTCGCAAAGCGACGCTCTAATCTTCGCAGCTCCGTCAATGAGTTTC
CTTACCCCTGTACTAGCTCCAGTTCCGCATCTGGTCCCAACGACAAACATATGCCCTTCA
TCTGTAGCTACTATAATCGAAGAGCTCCGAAAAGACCCTCTACGTAAAAAAAGCCCGCCA
AACAAAGTCGTCCTACCAAACAATACCCAAGTCAAAAACTCTCCAAAAGAAAACGAATCA
ATCGCATCATCAGCTGGTTGCTCGCAAACCTCTCGAACTAGCTCATTACAAAACACTGTC
CTATCCCTACCAAACAACACGGTTTTTTTAAGTCCTATCCCTGGCTACCAACACCACACC
ACTAACCCCTTATTACTTGGTTCAATAAAATTCCCTCAACAAATAAACGCGCTAAACTCG
CTCTAAAACTTCCCGACAAAGTCCTAACCTCTCAGGATCCGCCATTACCTCATCAGTACA
ACATACTGCACACAGAGTGACAAGACCCTTGCTGTAGTATACTAGCATGCCCCATTTGTA
CTCGTGCAATTATAATTAAAGTTCCAACATTCTTAATTTTTCCGCATATTTTGCTTTAAA
ATGAAGCACCCAAGTTCACAATGCAACTGAAGGCTCCAAAATTTTGCTTCCGAAAGTTCC
AATACCTATTTTCCCACGTAACTACGCTGGTTCAATTTTCCAAATGGTGCACTTAATTTT
CTCCATTAAAACGCCAACAAGGTGTTTTTTCGTCATTTTTCCTTCTTATGGTGTTTACAT
CAAACAGACCCTTCGTGCTTTATTTTCATATTTTATTACTTTACGAAATATAAATCAAGC
CAGATATTTTTCTCAGCTGCGTAGCTCGCCTTGCTTATATAGAACAAACAAAGAAATGTC
ATGATAATATGATTTTGTCCCCATATATATCACATGTCTTGTGTATCGTCTACTATGTAG
TACTGTTGGGGAAGATGGGACACCTCTAGCACATAATATCCAAATATCCCGATCGTGTTT
AAAATAATTAACAACGATTTATATCACTCGTGACGATAAAGTTTTCTAATTATTTTTTTT
TTTTAATTTTTTTGTTTACTTTAAAAAAAACGAGCAAATGAAATAAAAAGGTGTCCCATA
TTCCCCAACGCTACTATATACAATATAGTACTTTTGTCTGCTCATTCACACACAACAATA
GCTTCAGCGGTTCGACTGCAGGCATCGGTCCTGAAATTATACATAACCCACAAAAACTGC
CCCCCCCCCCGTTTTGGTATAAATACCCAAATAAAATATTTCTTTGTTTGTTCGAAGCTT
AAGCGTTCCGCTCGCAAAAATCTTTACGCCGATACATAATTACGTGCACAAATTGCTAGT
TTTTAAAAATTAAATGCCAGCTTAATGGGTTAGGCTGGCCTGCCCTGTTCACATTCACTT
TAAATTGCTTTGTTTTCCTCATTTTTTCCTATTGATTTATTTGTATTAACAAATTGTGTA
TATAGTGTCCGGTTCCCGAATACCGGTGCTCCAAATAAACTAACAGTTGCTATTTGATTT
AATATCCAAAGCCGCGAAGTTTAATGAGTATATGTATCTAATGAAGCTCTTTCCGCAAAT
TCATTTTTTCCAAGCGTAAAAAAATTATGACATCATTTTGTAGGTTGGGGAAAATGGACC
AACTTTTCATTCTATTTTTCCGTCCTGTGGTAGTAAACAAAGAACATTCAAAGGATTATG
AAACCCTTTCCTCACGAATCCCATATACCGTTGTTAATTATTTAAAACGCGATCAGGATA
TTTGGATATCATGTGTTAAAAGTGTCCCATTTTCCCCTACCCTACTATACCACAATTTGA
TAATTTAGACATCGTATATAAACATTAGTTTTCGTGACAATTTTTCTTGCGTAACAATCG
CAACGTCGGATTGTAAAATCGGATTTGCTGAAAGAGTTTCATTATATATTTATATTGCCC
AAGCATACCGGGCTTTATCAATGTACATACCGTCGCTCATTCGATATTTTGATTTTTAGG
GGAAAAATGAAAGTAGGAATTATAGGGTTCGGTAATCTTGGCCGGTTTCTTGCCGATTTT
ATTCAGAATTCCAAAGACATGGAGCTAGAATTCGTTTGGAATCGTTCTAAGGTTGAAATG
GAGGGCATCCCGGAAAAGCTAATCCTGGATAAACTGGAGGACCTCTTAAAAAGATCCGCG
GACCTAATTGTCGAAGTTGCGCATCCAAGTATTGCTAAGGATTACGGGAAAATGATTTTG
TCTGTGTCAGATTTTTTTATCGGTTCTCCGACGGCGCTGGCTGATCAGACGACAGAAGAT
AGTTTAAGAAGTACTGCTCTACAAAACGGCCGTGCTTTGTATGTGCCAAGCGGTGCGTTT
TGGGGCGCCCAGGATATACAAAAAATGGCGCAAAGTGGAAGTTTGAGTTCCTTAAAAGTC
ACCATGAAAAAGCATCCGTCGTGTTTTAAGCTGAGCTCCAAAAAAATGGAACTTCTGAAC
AAACAATCTATACATGAAGACAGAATTGTTGTGCTGTTCGAAGGTTCTGTTAGAGAACTC
TGTCCGCTTGCTCCTAACAACGTTAATACAATGGCAGCCGCTGCCATCGCCGCGTCCAAT
CTCGGTTTCGACAATGTAGTCGGCTGTCTGGTAGCAGACCCAAAAATGGGGGATTGGCAT
ATCGTTGAAATTGAAGTCGGCGGCGCAACAAGCGCTAACGGAGACAAATTTACTGTCAAA
ACTACCAGAAGTAACCCTGCAAACCCAGGAGCAGTGACTGGCAGTGCTACTTTCGCGTCT
TTTAGGCAGAGTTTGTTGCAGGCTAAAAATAGAGGACCTGGAGTTCATTTGTGCTGATTA
CATGCGTTTTGGTGTTTAAAAGAGGGGGTAAATCACTTTACAACAGTGATACCTCATTGG
TGCTGTTGGTATAAAGTGCAATATGGTCTAACTTAAGCGTAGTAATTATAAAATTGGTGG
GAGAAAATGAATCATGGTAGGCTACATTTAATAAACAATGGTACTGGTCGATTTTTTTGG
GAATAAATATTACATAATTGTTTTAAATTAAAAAAA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[79-137] 8.0E-8 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[84-137] 13.173 |
| CDD |
bHLH_dom (IPR011598) - T[85-142] 3.4638E-9 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[86-146] 1.18E-7 |
| SMART |
bHLH_dom (IPR011598) - T[90-143] 1.9E-6 |
| SMART |
PAS (IPR000014) - T[176-242] 9.1E-11 - T[337-403] 4.4E-5 |
| Pfam |
PAS_fold (IPR013767) - T[178-241] 1.2E-9 |
| ProSiteProfiles |
PAS (IPR000014) - T[181-244] 15.737 - T[339-405] 10.876 |
| CDD |
PAS (IPR000014) - T[185-235] 2.63985E-10 - T[347-433] 2.28472E-12 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[185-246] 6.55E-13 - T[347-435] 7.59E-17 |
| Pfam |
PAS_fold_3 (IPR013655) - T[361-434] 3.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIM2_HUMAN | 37.772 % | 249 | 2.22E-72 |
| NPAS3_HUMAN | 42.963 % | 327 | 4.36E-99 |
| NPAS1_HUMAN | 42.455 % | 296 | 1.45E-90 |
