- Transcript 'KH2012:KH.S555.1.v2....' >
- Region 'REG00000055' >
- Transcript 'KH2012:KH.L154.11.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.11.v1.A.SL5-1
Possible name(s)
ANKS3; FANK1; RNASEL
Gene model
Location
KhL154 [427,972 / 439,679]
Amino acid sequence
Length: 538
>KH.L154.11.v1.A.SL5-1
ISWLFFKIMGDLDESGIFDASLSMWKGLKQNKDGTFSYEDEEFDPIPLDIFTAASLGESE
IVQEILDRKAARLNSVNRLGWSALMYASYMGHENTVHCLLDNSADPNQRTPQGYSSIILA
SMCGNEHCIHVLIQQGGDINAVDKRGWSALLHSASAGHQQTTEFLIKCGANCEIMEPKHG
LTPLMEAAASGHEIIVQQLLQKGVDVSRVNHQGENAWTLALAYDHRKIASMIEQHKIHRR
PKNNNLPGYVNHKNGKSSKDNNCGQSGPRIHAGPKAFAQMTGLGADGKPHPHSTVPHFLQ
DNPPHLNEDTRQPPWEGPKDLESLLHDIGCSKHLPIFQKQDIDLRIFLSLTEEDLKEIGI
TLFGPRRRMVSCIARLTSGIQVHLDRIESAYADALNAKQQRLQVKLKENQEEKEELKSQV
AQERELRKVTESVLMEHKEMWSSLLRLAEKSSNSYLRIAQALDHARMQFHHSEKSHQNRK
PNSQRQIQDNKADVSKSLHEVETSFHHAREYMMKMQSILQRSSSNRPQNFNAERKDRG
Nucleotide sequence
Length: 2,465
>KH2012:KH.L154.11.v1.A.SL5-1
CTCTATAGGTTAAAAATATATAAAACTACACAAAAAAATAGCCTACTGATTTAGTGCAGT
ATAAGCAAGCCTTAAATTTCTTGGCTGTTTTTTAAAATAATGGGCGATTTGGATGAATCG
GGCATTTTTGATGCCAGTTTGTCTATGTGGAAAGGACTAAAGCAAAATAAAGATGGCACC
TTCAGCTACGAAGACGAAGAATTTGATCCGATACCTCTCGATATATTTACTGCAGCTTCA
CTTGGAGAGAGTGAGATTGTACAAGAAATATTGGACAGAAAAGCCGCACGTCTCAATTCT
GTGAATAGGCTTGGTTGGTCTGCGTTGATGTATGCGTCATATATGGGACATGAAAACACA
GTGCACTGCTTACTTGATAACTCTGCTGATCCAAACCAACGTACACCGCAAGGGTATTCT
TCCATTATCCTGGCATCTATGTGCGGAAATGAACATTGTATTCATGTTTTAATACAGCAA
GGTGGAGATATAAATGCAGTCGACAAACGTGGTTGGTCTGCTTTGTTACATTCAGCAAGT
GCGGGCCATCAACAAACCACTGAATTTCTCATTAAATGTGGCGCCAACTGTGAGATTATG
GAGCCAAAACATGGCTTGACGCCATTAATGGAAGCCGCGGCATCAGGTCACGAAATTATT
GTACAGCAATTATTACAAAAAGGGGTAGATGTGTCCCGTGTAAATCACCAAGGAGAAAAT
GCCTGGACGCTCGCGCTTGCCTACGACCACCGAAAAATCGCCAGCATGATTGAACAACAT
AAGATACATAGGAGACCAAAGAATAACAATTTACCAGGATACGTTAACCACAAAAATGGA
AAATCGTCAAAAGACAATAACTGTGGACAATCTGGTCCACGAATCCACGCTGGGCCGAAA
GCTTTTGCGCAAATGACGGGGTTAGGGGCAGACGGAAAACCTCACCCCCACTCCACAGTA
CCCCACTTTTTACAAGACAATCCTCCACACTTAAATGAGGATACACGACAACCACCATGG
GAGGGCCCTAAGGATCTTGAGTCCTTGTTGCACGACATTGGATGCAGCAAACATCTTCCT
ATCTTCCAGAAACAGGACATCGATCTTCGGATCTTCCTCTCTCTTACTGAGGAAGATTTA
AAAGAAATCGGAATCACGTTATTTGGTCCACGTCGGCGAATGGTTTCTTGCATCGCACGA
TTAACGAGTGGTATACAAGTCCATTTAGACAGAATAGAGTCCGCTTATGCTGATGCGTTA
AATGCTAAACAACAAAGGCTGCAAGTAAAGTTGAAAGAGAACCAAGAAGAGAAAGAAGAA
TTAAAATCACAAGTTGCACAAGAACGCGAGTTGCGTAAAGTCACTGAGAGTGTTTTGATG
GAACATAAAGAAATGTGGTCGTCGTTGTTGAGGCTCGCTGAAAAATCTTCAAATTCCTAT
CTGAGGATTGCGCAAGCGTTAGATCATGCAAGAATGCAGTTTCATCACTCAGAAAAATCT
CACCAAAATCGAAAACCAAACAGCCAAAGACAGATCCAAGATAATAAAGCTGATGTATCA
AAGTCCTTACATGAGGTGGAGACTTCATTTCACCATGCAAGGGAGTACATGATGAAGATG
CAGAGCATCCTCCAAAGATCATCTTCCAATCGGCCCCAGAACTTCAACGCAGAGAGAAAA
GACCGGGGATGAAATAAAGAAAAAAAATTAAAAATTTGTAACCTCTTTGCGGAAAAAAAT
TTTCCATTTAATTTTTTAAATGAAGCTACCATTTTTGCTTTGGCCACGGTTGTAGCTTTT
AACATAGATTTCTCGAAAAAAAAGTCAAAATCATCAAAATCTTGGTGTTCAAGGTGTCTC
ATGCTTGTATAATACTGGTTCTACTGTGCCAAGTTGTGCCAAGTTACTACGCTGCCCCCT
TTGGTACCCCTAGGCAATTAACCCCTTTGGGTAACCTGTTGAACCCATTTTAATGGGTTC
GGGGTGCTCCAACCCCCACACAAAAAGCCTGAAAGTTAATATTTTACCTGTTTCTCTGCG
TATTGCTCTTAAGTTACCGTCGTTGTGGACATTACACACAATTATCACTCGTCTGAAAGA
TATATTCTGTACTTTCACTCAATTCAGACGTTTTTATATAAAAACAGCGGTTAAAACCCA
ATCATATTAACCCTTCTCCAGATTTTTTCACAACTCCCAGAATTTTTTCATTTATTTTTC
AATTTCGCTAAAAAAAAATTTGTGCCAAAAATTAAGTACAATAACCGCAAAAAAACGGTT
TTATTTTTTTGCCGCTAAGTTTCCAAAACGTTACTGACCTTTTAATCCAAGACTTCAATA
TAAAGAAATGACGTTTTCTGTTCCGATTATGATTTTCGTTCGTTTATTGCCACTGTCTTA
CCTAACATGCGACCAAATACAACGATCGTTTTTACTCGTTGCCTGAATACAAAATCAGAT
TCAAA
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[49-245] 1.5E-46 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[50-244] 39.019 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[50-109] 5.0E-8 - T[118-208] 9.6E-14 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[51-236] 1.37E-44 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[74-200] 2.95497E-33 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[79-111] 9.11 - T[112-144] 10.286 - T[179-211] 12.155 |
| SMART |
Ankyrin_rpt (IPR002110) - T[79-108] 2.0E-4 - T[112-141] 0.0068 - T[145-174] 0.62 - T[179-208] 2.7E-4 |
| SMART |
SAM (IPR001660) - T[313-379] 9.8E-13 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[314-377] 6.46E-14 |
| ProSiteProfiles |
SAM (IPR001660) - T[316-379] 11.351 |
| Pfam |
SAM (IPR001660) - T[319-376] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ANKH1_HUMAN | 32.609 % | 86.7 | 1.18E-17 |
| ANKS3_HUMAN | 41.754 % | 225 | 5.38E-66 |
| FANK1_HUMAN | 29.075 % | 100 | 5.14E-23 |