- Transcript 'KH2012:KH.C2.187.v1....' >
- Molecular Tool 'cicl14m06-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C8.163.v4....' >
- Transcript 'KH2012:KH.S654.2.v2....' >
- Transcript 'KH2012:KH.L154.11.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.11.v1.A.SL1-1
Possible name(s)
ANKS3; FANK1; RNASEL
Gene model
Location
KhL154 [427,972 / 439,696]
Amino acid sequence
Length: 538
>KH.L154.11.v1.A.SL1-1
ISWLFFKIMGDLDESGIFDASLSMWKGLKQNKDGTFSYEDEEFDPIPLDIFTAASLGESE
IVQEILDRKAARLNSVNRLGWSALMYASYMGHENTVHCLLDNSADPNQRTPQGYSSIILA
SMCGNEHCIHVLIQQGGDINAVDKRGWSALLHSASAGHQQTTEFLIKCGANCEIMEPKHG
LTPLMEAAASGHEIIVQQLLQKGVDVSRVNHQGENAWTLALAYDHRKIASMIEQHKIHRR
PKNNNLPGYVNHKNGKSSKDNNCGQSGPRIHAGPKAFAQMTGLGADGKPHPHSTVPHFLQ
DNPPHLNEDTRQPPWEGPKDLESLLHDIGCSKHLPIFQKQDIDLRIFLSLTEEDLKEIGI
TLFGPRRRMVSCIARLTSGIQVHLDRIESAYADALNAKQQRLQVKLKENQEEKEELKSQV
AQERELRKVTESVLMEHKEMWSSLLRLAEKSSNSYLRIAQALDHARMQFHHSEKSHQNRK
PNSQRQIQDNKADVSKSLHEVETSFHHAREYMMKMQSILQRSSSNRPQNFNAERKDRG
Nucleotide sequence
Length: 2,482
>KH2012:KH.L154.11.v1.A.SL1-1
ATTTACCTGTAGAGCAGCTCTATAGGTTAAAAATATATAAAACTACACAAAAAAATAGCC
TACTGATTTAGTGCAGTATAAGCAAGCCTTAAATTTCTTGGCTGTTTTTTAAAATAATGG
GCGATTTGGATGAATCGGGCATTTTTGATGCCAGTTTGTCTATGTGGAAAGGACTAAAGC
AAAATAAAGATGGCACCTTCAGCTACGAAGACGAAGAATTTGATCCGATACCTCTCGATA
TATTTACTGCAGCTTCACTTGGAGAGAGTGAGATTGTACAAGAAATATTGGACAGAAAAG
CCGCACGTCTCAATTCTGTGAATAGGCTTGGTTGGTCTGCGTTGATGTATGCGTCATATA
TGGGACATGAAAACACAGTGCACTGCTTACTTGATAACTCTGCTGATCCAAACCAACGTA
CACCGCAAGGGTATTCTTCCATTATCCTGGCATCTATGTGCGGAAATGAACATTGTATTC
ATGTTTTAATACAGCAAGGTGGAGATATAAATGCAGTCGACAAACGTGGTTGGTCTGCTT
TGTTACATTCAGCAAGTGCGGGCCATCAACAAACCACTGAATTTCTCATTAAATGTGGCG
CCAACTGTGAGATTATGGAGCCAAAACATGGCTTGACGCCATTAATGGAAGCCGCGGCAT
CAGGTCACGAAATTATTGTACAGCAATTATTACAAAAAGGGGTAGATGTGTCCCGTGTAA
ATCACCAAGGAGAAAATGCCTGGACGCTCGCGCTTGCCTACGACCACCGAAAAATCGCCA
GCATGATTGAACAACATAAGATACATAGGAGACCAAAGAATAACAATTTACCAGGATACG
TTAACCACAAAAATGGAAAATCGTCAAAAGACAATAACTGTGGACAATCTGGTCCACGAA
TCCACGCTGGGCCGAAAGCTTTTGCGCAAATGACGGGGTTAGGGGCAGACGGAAAACCTC
ACCCCCACTCCACAGTACCCCACTTTTTACAAGACAATCCTCCACACTTAAATGAGGATA
CACGACAACCACCATGGGAGGGCCCTAAGGATCTTGAGTCCTTGTTGCACGACATTGGAT
GCAGCAAACATCTTCCTATCTTCCAGAAACAGGACATCGATCTTCGGATCTTCCTCTCTC
TTACTGAGGAAGATTTAAAAGAAATCGGAATCACGTTATTTGGTCCACGTCGGCGAATGG
TTTCTTGCATCGCACGATTAACGAGTGGTATACAAGTCCATTTAGACAGAATAGAGTCCG
CTTATGCTGATGCGTTAAATGCTAAACAACAAAGGCTGCAAGTAAAGTTGAAAGAGAACC
AAGAAGAGAAAGAAGAATTAAAATCACAAGTTGCACAAGAACGCGAGTTGCGTAAAGTCA
CTGAGAGTGTTTTGATGGAACATAAAGAAATGTGGTCGTCGTTGTTGAGGCTCGCTGAAA
AATCTTCAAATTCCTATCTGAGGATTGCGCAAGCGTTAGATCATGCAAGAATGCAGTTTC
ATCACTCAGAAAAATCTCACCAAAATCGAAAACCAAACAGCCAAAGACAGATCCAAGATA
ATAAAGCTGATGTATCAAAGTCCTTACATGAGGTGGAGACTTCATTTCACCATGCAAGGG
AGTACATGATGAAGATGCAGAGCATCCTCCAAAGATCATCTTCCAATCGGCCCCAGAACT
TCAACGCAGAGAGAAAAGACCGGGGATGAAATAAAGAAAAAAAATTAAAAATTTGTAACC
TCTTTGCGGAAAAAAATTTTCCATTTAATTTTTTAAATGAAGCTACCATTTTTGCTTTGG
CCACGGTTGTAGCTTTTAACATAGATTTCTCGAAAAAAAAGTCAAAATCATCAAAATCTT
GGTGTTCAAGGTGTCTCATGCTTGTATAATACTGGTTCTACTGTGCCAAGTTGTGCCAAG
TTACTACGCTGCCCCCTTTGGTACCCCTAGGCAATTAACCCCTTTGGGTAACCTGTTGAA
CCCATTTTAATGGGTTCGGGGTGCTCCAACCCCCACACAAAAAGCCTGAAAGTTAATATT
TTACCTGTTTCTCTGCGTATTGCTCTTAAGTTACCGTCGTTGTGGACATTACACACAATT
ATCACTCGTCTGAAAGATATATTCTGTACTTTCACTCAATTCAGACGTTTTTATATAAAA
ACAGCGGTTAAAACCCAATCATATTAACCCTTCTCCAGATTTTTTCACAACTCCCAGAAT
TTTTTCATTTATTTTTCAATTTCGCTAAAAAAAAATTTGTGCCAAAAATTAAGTACAATA
ACCGCAAAAAAACGGTTTTATTTTTTTGCCGCTAAGTTTCCAAAACGTTACTGACCTTTT
AATCCAAGACTTCAATATAAAGAAATGACGTTTTCTGTTCCGATTATGATTTTCGTTCGT
TTATTGCCACTGTCTTACCTAACATGCGACCAAATACAACGATCGTTTTTACTCGTTGCC
TGAATACAAAATCAGATTCAAA
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[49-245] 1.5E-46 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[50-244] 39.019 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[50-109] 5.0E-8 - T[118-208] 9.6E-14 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[51-236] 1.37E-44 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[74-200] 2.95497E-33 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[79-111] 9.11 - T[112-144] 10.286 - T[179-211] 12.155 |
| SMART |
Ankyrin_rpt (IPR002110) - T[79-108] 2.0E-4 - T[112-141] 0.0068 - T[145-174] 0.62 - T[179-208] 2.7E-4 |
| SMART |
SAM (IPR001660) - T[313-379] 9.8E-13 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[314-377] 6.46E-14 |
| ProSiteProfiles |
SAM (IPR001660) - T[316-379] 11.351 |
| Pfam |
SAM (IPR001660) - T[319-376] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ANKH1_HUMAN | 32.609 % | 86.7 | 1.18E-17 |
| ANKS3_HUMAN | 41.754 % | 225 | 5.38E-66 |
| FANK1_HUMAN | 29.075 % | 100 | 5.14E-23 |