- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'KH2012:KH.L154.10.v6...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v6.A.SL3-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [479,843 / 494,550]
Amino acid sequence
Length: 357
>KH.L154.10.v6.A.SL3-1
KSDAPEATMRYTLDNLSSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAETGGVTK
ENTTKSWSATKTTSTTTTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDVSSKSL
ADKYSLGSSYSSTRKDMSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMPAPSAK
DARKMFTAMDNSSNKSTGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVDINNFS
GSWASGMAFCALVHNFFPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVEDMMIM
GNRPDSKCVFTYVQSLYNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 1,615
>KH2012:KH.L154.10.v6.A.SL3-1
AAATCCGACGCACCCGAAGCCACCATGCGGTACACGCTTGACAATCTTAGCTCAGTGACC
GAAGAGGCAATCTTAGAGAAATTGTTGTACGAGGCTGAAGAGTTTGACGACAGAAGGAAA
ATAAGGCGAGCTATTCGGGATTTGAGGAAGAAGAAAGCAGAAACTGGCGGAGTTACAAAA
GAAAATACAACCAAGAGTTGGTCGGCAACTAAAACTACGTCAACCACCACCACACGAGCG
CTACCTAACGGATCTCTGAAAACAGAGTCAAAAGAAACGACGTCCATCAGCGGATATCAA
CGAAAAACTGCGTCACCTCTGGGTAGCAAAAAAGATACCGATGTGTCGTCAAAGTCTTTA
GCAGACAAATACTCGCTCGGGTCAAGCTATTCATCCACACGTAAAGACATGTCTTCAACT
TCGACGAAAAAGGTCGGTAGCATTTTTGACCGAGAGGACGCCGCTGCTTCCAAGCGCCCC
CAAACGGACAAACGCCGCGAAGTGATGCGGAATCGATCAATGCCTGCTCCGTCTGCAAAA
GACGCGCGAAAGATGTTCACAGCAATGGACAATTCATCCAATAAGTCTACTGGAGGTAAA
AAAGTTGGACGTAGCCCGACATTTGTGGTCCCAAACGCGAACAACGTGAAACAAATGTTG
CTCAAATGGTGCCAGGCAAAAACCAGAGGATATGACCATGTTGACATCAACAACTTCAGT
GGTAGCTGGGCAAGCGGTATGGCATTTTGTGCCCTCGTTCATAATTTCTTCCCGGAGGCC
TACGACTACTCAACCCTTGACCCAAAAGCAAGAGCTAAAAACTTCACGCTGGCTTTCGAC
GCCGCAGAGAAATACGCTGACGCTGACCAATTACTTGACGTTGAAGACATGATGATTATG
GGCAACCGACCTGACAGCAAATGTGTCTTCACATACGTCCAGTCTTTATACAACAAGTTA
CGTCGGTTCGAAAAGCCCCTGACCCCTCTTTCACCCACCTTTAAAGTAATGGGTGGACTT
TCACCCACCGCCAAACTCCTCGCCAGCGAGGAGGCGGGAAAGTCCCAAAGATGACGTGAC
GGTGACGTCACAGTTAATTCACGACCAGTCACTCTTCTACCGTTTTTTGCTTTAAATATT
TCTATATATACACTTTACTGCTCTGTATCATTTTATATTCACCGCTGAAGCAAATCGAAT
CAAAATCTTACGCAGCGCTGATCCATACATACGCTGTAATACTTAATCCTCGATTTTGCA
GGTATTCCATGTAATATAGTTTTATGATCCAACTGTCGCTGTTTAAGCCTAAATTCTTTT
TTCATGACTTAGAAATTTGGGTAATTGCAATCATACAGTTCAAGAAGCAAATTCAGTTCA
AGCTGCTCGTTTTACAGTTATTTTTCTGTAATTTTCCATCACCATTTTGTTAGCCCGCAT
ATAGTAAATGTAGACTAATGTTGCTCCGCTTTAAATTAAACAGTGTTTTGAGCCATTGCT
CCTGTACAAGAGCAACCATGATTGTGATCTTGATTAAACAATTTTAAAACGTTTATGAAT
TTGTCAAGAAATCATGTTCACGTATAGTACTGTGGAGTAATAGAGGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[12-52] 2.3E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[208-321] 3.14E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[212-325] 5.3E-37 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[214-318] 12.743 |
| SMART |
CH-domain (IPR001715) - T[216-316] 3.8E-20 |
| Pfam |
CH-domain (IPR001715) - T[216-321] 3.6E-19 |
| CDD |
CH-domain (IPR001715) - T[217-321] 3.00711E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 260 | 2.56E-79 |
| SMTL2_HUMAN | 52.047 % | 200 | 2.57E-60 |
| SMTL1_HUMAN | 63.551 % | 163 | 3.03E-46 |