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- Transcript 'KH2012:KH.L154.10.v3...' >
- Transcript 'KH2012:KH.C8.143.v5....' >
- Transcript 'KH2012:KH.L154.10.v5...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v5.A.SL5-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [473,722 / 494,550]
Amino acid sequence
Length: 445
>KH.L154.10.v5.A.SL5-1
LNGTNDFVKRVEIRKVLKNKKNSSETGESYIYHSSNIITISQVLSLVATMPVFQNAESER
LPLRLLVQYYDSLSLEKAKKIHGTGTPEKSDAPEATMRYTLDNLSSVTEEAILEKLLYEA
EEFDDRRKIRRAIRDLRKKKAETGGVTKENTTKSWSATKTTSTTTTRALPNGSLKTESKE
TTSISGYQRKTASPLGSKKDTDVSSKSLADKYSLGSSYSSTRKDMSSTSTKKVGSIFDRE
DAAASKRPQTDKRREVMRNRSMPAPSAKDARKMFTAMDNSSNKSTGGKKVGRSPTFVVPN
ANNVKQMLLKWCQAKTRGYDHVDINNFSGSWASGMAFCALVHNFFPEAYDYSTLDPKARA
KNFTLAFDAAEKYADADQLLDVEDMMIMGNRPDSKCVFTYVQSLYNKLRRFEKPLTPLSP
TFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 1,879
>KH2012:KH.L154.10.v5.A.SL5-1
TTAAACGGGACAAACGACTTCGTTAAAAGAGTTGAAATTAGGAAAGTTTTAAAGAATAAA
AAGAACTCAAGCGAAACAGGTGAGTCGTATATTTATCACTCAAGTAATATTATTACAATT
AGTCAGGTGTTGTCATTAGTAGCTACCATGCCTGTTTTTCAAAATGCTGAAAGCGAGAGA
TTGCCATTACGTTTGCTAGTACAGTATTATGACAGCTTGTCGTTAGAAAAGGCGAAGAAA
ATTCATGGCACTGGTACACCAGAGAAATCCGACGCACCCGAAGCCACCATGCGGTACACG
CTTGACAATCTTAGCTCAGTGACCGAAGAGGCAATCTTAGAGAAATTGTTGTACGAGGCT
GAAGAGTTTGACGACAGAAGGAAAATAAGGCGAGCTATTCGGGATTTGAGGAAGAAGAAA
GCAGAAACTGGCGGAGTTACAAAAGAAAATACAACCAAGAGTTGGTCGGCAACTAAAACT
ACGTCAACCACCACCACACGAGCGCTACCTAACGGATCTCTGAAAACAGAGTCAAAAGAA
ACGACGTCCATCAGCGGATATCAACGAAAAACTGCGTCACCTCTGGGTAGCAAAAAAGAT
ACCGATGTGTCGTCAAAGTCTTTAGCAGACAAATACTCGCTCGGGTCAAGCTATTCATCC
ACACGTAAAGACATGTCTTCAACTTCGACGAAAAAGGTCGGTAGCATTTTTGACCGAGAG
GACGCCGCTGCTTCCAAGCGCCCCCAAACGGACAAACGCCGCGAAGTGATGCGGAATCGA
TCAATGCCTGCTCCGTCTGCAAAAGACGCGCGAAAGATGTTCACAGCAATGGACAATTCA
TCCAATAAGTCTACTGGAGGTAAAAAAGTTGGACGTAGCCCGACATTTGTGGTCCCAAAC
GCGAACAACGTGAAACAAATGTTGCTCAAATGGTGCCAGGCAAAAACCAGAGGATATGAC
CATGTTGACATCAACAACTTCAGTGGTAGCTGGGCAAGCGGTATGGCATTTTGTGCCCTC
GTTCATAATTTCTTCCCGGAGGCCTACGACTACTCAACCCTTGACCCAAAAGCAAGAGCT
AAAAACTTCACGCTGGCTTTCGACGCCGCAGAGAAATACGCTGACGCTGACCAATTACTT
GACGTTGAAGACATGATGATTATGGGCAACCGACCTGACAGCAAATGTGTCTTCACATAC
GTCCAGTCTTTATACAACAAGTTACGTCGGTTCGAAAAGCCCCTGACCCCTCTTTCACCC
ACCTTTAAAGTAATGGGTGGACTTTCACCCACCGCCAAACTCCTCGCCAGCGAGGAGGCG
GGAAAGTCCCAAAGATGACGTGACGGTGACGTCACAGTTAATTCACGACCAGTCACTCTT
CTACCGTTTTTTGCTTTAAATATTTCTATATATACACTTTACTGCTCTGTATCATTTTAT
ATTCACCGCTGAAGCAAATCGAATCAAAATCTTACGCAGCGCTGATCCATACATACGCTG
TAATACTTAATCCTCGATTTTGCAGGTATTCCATGTAATATAGTTTTATGATCCAACTGT
CGCTGTTTAAGCCTAAATTCTTTTTTCATGACTTAGAAATTTGGGTAATTGCAATCATAC
AGTTCAAGAAGCAAATTCAGTTCAAGCTGCTCGTTTTACAGTTATTTTTCTGTAATTTTC
CATCACCATTTTGTTAGCCCGCATATAGTAAATGTAGACTAATGTTGCTCCGCTTTAAAT
TAAACAGTGTTTTGAGCCATTGCTCCTGTACAAGAGCAACCATGATTGTGATCTTGATTA
AACAATTTTAAAACGTTTATGAATTTGTCAAGAAATCATGTTCACGTATAGTACTGTGGA
GTAATAGAGGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[100-140] 3.1E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[296-409] 4.97E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[300-413] 8.0E-37 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[302-406] 12.743 |
| SMART |
CH-domain (IPR001715) - T[304-404] 3.8E-20 |
| Pfam |
CH-domain (IPR001715) - T[304-409] 5.4E-19 |
| CDD |
CH-domain (IPR001715) - T[305-409] 7.92027E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 259 | 4.68E-78 |
| SMTL2_HUMAN | 52.047 % | 200 | 2.97E-59 |
| SMTL1_HUMAN | 63.551 % | 163 | 2.55E-45 |