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- Transcript 'KH2012:KH.L154.10.v4...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v4.A.SL6-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [459,953 / 494,550]
Amino acid sequence
Length: 662
>KH.L154.10.v4.A.SL6-1
ENKLFLHLDSKQRDFLKENFFLKKILQSLKQKHQGPDPVIERKDPGIGKRRFSRRFRKKS
SNKSFDFSEPAEEILSSDSLSPRSNESPRSDVSGAASPVATPSGSQRSSKSSARVILRVI
GKKLFKSKSQSYSPAPIGSPKSPSEKSTSPINSPTSQSPSVTSQKRTPVKTSSEIMAEVL
ARSRESARAVERDRFNVTEQAVADDYTSYSIEELQSMLNGTNDFVKRVEIRKVLKNKKNS
SETGESYIYHSSNIITISQVLSLVATMPVFQNAESERLPLRLLVQYYDSLSLEKAKKIHG
TGTPEKSDAPEATMRYTLDNLSSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAET
GGVTKENTTKSWSATKTTSTTTTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDV
SSKSLADKYSLGSSYSSTRKDMSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMP
APSAKDARKMFTAMDNSSNKSTGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVD
INNFSGSWASGMAFCALVHNFFPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVE
DMMIMGNRPDSKCVFTYVQSLYNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKS
QR
Nucleotide sequence
Length: 2,584
>KH2012:KH.L154.10.v4.A.SL6-1
AGATACGAAGCGTTTGTGACGTAACGATGGTGGTATTGTGACGTAACAGTATAGGAAAAC
AAACTGTTTCTTCACCTGGACAGTAAACAAAGAGATTTCTTGAAAGAAAATTTCTTTTTA
AAGAAAATTCTTCAAAGTTTGAAACAAAAACACCAAGGCCCAGACCCAGTTATTGAGAGA
AAAGATCCAGGCATCGGAAAGAGGAGATTTTCTCGTCGATTCCGGAAGAAATCTTCAAAT
AAGAGCTTCGACTTTTCGGAACCGGCGGAGGAAATTTTAAGTTCTGATTCTTTGTCGCCT
AGGTCCAACGAAAGTCCAAGGTCTGACGTCAGCGGCGCCGCTTCTCCCGTAGCAACACCT
AGCGGTAGCCAAAGATCCAGCAAAAGCTCCGCGCGAGTGATTCTGAGAGTCATCGGGAAA
AAACTCTTTAAATCGAAATCCCAATCTTATTCTCCAGCGCCTATAGGGTCCCCCAAATCC
CCAAGCGAGAAGTCGACGTCACCTATAAACTCTCCCACGTCACAGAGCCCCTCTGTGACG
TCACAAAAGAGAACCCCTGTCAAAACTTCGAGTGAAATAATGGCAGAAGTTTTGGCTCGA
TCTCGGGAATCTGCGCGTGCGGTGGAGCGTGACCGGTTCAACGTCACAGAGCAAGCCGTC
GCGGATGATTACACCTCCTACAGCATTGAGGAATTGCAGTCGATGTTAAACGGGACAAAC
GACTTCGTTAAAAGAGTTGAAATTAGGAAAGTTTTAAAGAATAAAAAGAACTCAAGCGAA
ACAGGTGAGTCGTATATTTATCACTCAAGTAATATTATTACAATTAGTCAGGTGTTGTCA
TTAGTAGCTACCATGCCTGTTTTTCAAAATGCTGAAAGCGAGAGATTGCCATTACGTTTG
CTAGTACAGTATTATGACAGCTTGTCGTTAGAAAAGGCGAAGAAAATTCATGGCACTGGT
ACACCAGAGAAATCCGACGCACCCGAAGCCACCATGCGGTACACGCTTGACAATCTTAGC
TCAGTGACCGAAGAGGCAATCTTAGAGAAATTGTTGTACGAGGCTGAAGAGTTTGACGAC
AGAAGGAAAATAAGGCGAGCTATTCGGGATTTGAGGAAGAAGAAAGCAGAAACTGGCGGA
GTTACAAAAGAAAATACAACCAAGAGTTGGTCGGCAACTAAAACTACGTCAACCACCACC
ACACGAGCGCTACCTAACGGATCTCTGAAAACAGAGTCAAAAGAAACGACGTCCATCAGC
GGATATCAACGAAAAACTGCGTCACCTCTGGGTAGCAAAAAAGATACCGATGTGTCGTCA
AAGTCTTTAGCAGACAAATACTCGCTCGGGTCAAGCTATTCATCCACACGTAAAGACATG
TCTTCAACTTCGACGAAAAAGGTCGGTAGCATTTTTGACCGAGAGGACGCCGCTGCTTCC
AAGCGCCCCCAAACGGACAAACGCCGCGAAGTGATGCGGAATCGATCAATGCCTGCTCCG
TCTGCAAAAGACGCGCGAAAGATGTTCACAGCAATGGACAATTCATCCAATAAGTCTACT
GGAGGTAAAAAAGTTGGACGTAGCCCGACATTTGTGGTCCCAAACGCGAACAACGTGAAA
CAAATGTTGCTCAAATGGTGCCAGGCAAAAACCAGAGGATATGACCATGTTGACATCAAC
AACTTCAGTGGTAGCTGGGCAAGCGGTATGGCATTTTGTGCCCTCGTTCATAATTTCTTC
CCGGAGGCCTACGACTACTCAACCCTTGACCCAAAAGCAAGAGCTAAAAACTTCACGCTG
GCTTTCGACGCCGCAGAGAAATACGCTGACGCTGACCAATTACTTGACGTTGAAGACATG
ATGATTATGGGCAACCGACCTGACAGCAAATGTGTCTTCACATACGTCCAGTCTTTATAC
AACAAGTTACGTCGGTTCGAAAAGCCCCTGACCCCTCTTTCACCCACCTTTAAAGTAATG
GGTGGACTTTCACCCACCGCCAAACTCCTCGCCAGCGAGGAGGCGGGAAAGTCCCAAAGA
TGACGTGACGGTGACGTCACAGTTAATTCACGACCAGTCACTCTTCTACCGTTTTTTGCT
TTAAATATTTCTATATATACACTTTACTGCTCTGTATCATTTTATATTCACCGCTGAAGC
AAATCGAATCAAAATCTTACGCAGCGCTGATCCATACATACGCTGTAATACTTAATCCTC
GATTTTGCAGGTATTCCATGTAATATAGTTTTATGATCCAACTGTCGCTGTTTAAGCCTA
AATTCTTTTTTCATGACTTAGAAATTTGGGTAATTGCAATCATACAGTTCAAGAAGCAAA
TTCAGTTCAAGCTGCTCGTTTTACAGTTATTTTTCTGTAATTTTCCATCACCATTTTGTT
AGCCCGCATATAGTAAATGTAGACTAATGTTGCTCCGCTTTAAATTAAACAGTGTTTTGA
GCCATTGCTCCTGTACAAGAGCAACCATGATTGTGATCTTGATTAAACAATTTTAAAACG
TTTATGAATTTGTCAAGAAATCATGTTCACGTATAGTACTGTGGAGTAATAGAGGATACC
GTTA
| Pfam |
SMTN (IPR022189) - T[317-357] 5.1E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[513-626] 1.01E-31 |
| Gene3D |
CH_dom_sf (IPR036872) - T[517-630] 1.5E-36 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[519-623] 12.743 |
| SMART |
CH-domain (IPR001715) - T[521-621] 3.8E-20 |
| Pfam |
CH-domain (IPR001715) - T[521-626] 1.0E-18 |
| CDD |
CH-domain (IPR001715) - T[522-626] 1.84137E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 260 | 8.36E-76 |
| SMTL2_HUMAN | 52.047 % | 201 | 1.43E-57 |
| SMTL1_HUMAN | 63.551 % | 164 | 2.75E-44 |