- Transcript 'KH2012:KH.L154.10.v3...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v3.R.ND1-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [477,283 / 494,550]
Amino acid sequence
Length: 402
>KH.L154.10.v3.R.ND1-1
LSLVATMPVFQNAESERLPLRLLVQYYDSLSLEKAKKIHGTGTPEKSDAPEATMRYTLDN
LSSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAETGGVTKENTTKSWSATKTTST
TTTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDVSSKSLADKYSLGSSYSSTRK
DMSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMPAPSAKDARKMFTAMDNSSNK
STGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVDINNFSGSWASGMAFCALVHN
FFPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVEDMMIMGNRPDSKCVFTYVQS
LYNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 1,751
>KH2012:KH.L154.10.v3.R.ND1-1
GTTGTCATTAGTAGCTACCATGCCTGTTTTTCAAAATGCTGAAAGCGAGAGATTGCCATT
ACGTTTGCTAGTACAGTATTATGACAGCTTGTCGTTAGAAAAGGCGAAGAAAATTCATGG
CACTGGTACACCAGAGAAATCCGACGCACCCGAAGCCACCATGCGGTACACGCTTGACAA
TCTTAGCTCAGTGACCGAAGAGGCAATCTTAGAGAAATTGTTGTACGAGGCTGAAGAGTT
TGACGACAGAAGGAAAATAAGGCGAGCTATTCGGGATTTGAGGAAGAAGAAAGCAGAAAC
TGGCGGAGTTACAAAAGAAAATACAACCAAGAGTTGGTCGGCAACTAAAACTACGTCAAC
CACCACCACACGAGCGCTACCTAACGGATCTCTGAAAACAGAGTCAAAAGAAACGACGTC
CATCAGCGGATATCAACGAAAAACTGCGTCACCTCTGGGTAGCAAAAAAGATACCGATGT
GTCGTCAAAGTCTTTAGCAGACAAATACTCGCTCGGGTCAAGCTATTCATCCACACGTAA
AGACATGTCTTCAACTTCGACGAAAAAGGTCGGTAGCATTTTTGACCGAGAGGACGCCGC
TGCTTCCAAGCGCCCCCAAACGGACAAACGCCGCGAAGTGATGCGGAATCGATCAATGCC
TGCTCCGTCTGCAAAAGACGCGCGAAAGATGTTCACAGCAATGGACAATTCATCCAATAA
GTCTACTGGAGGTAAAAAAGTTGGACGTAGCCCGACATTTGTGGTCCCAAACGCGAACAA
CGTGAAACAAATGTTGCTCAAATGGTGCCAGGCAAAAACCAGAGGATATGACCATGTTGA
CATCAACAACTTCAGTGGTAGCTGGGCAAGCGGTATGGCATTTTGTGCCCTCGTTCATAA
TTTCTTCCCGGAGGCCTACGACTACTCAACCCTTGACCCAAAAGCAAGAGCTAAAAACTT
CACGCTGGCTTTCGACGCCGCAGAGAAATACGCTGACGCTGACCAATTACTTGACGTTGA
AGACATGATGATTATGGGCAACCGACCTGACAGCAAATGTGTCTTCACATACGTCCAGTC
TTTATACAACAAGTTACGTCGGTTCGAAAAGCCCCTGACCCCTCTTTCACCCACCTTTAA
AGTAATGGGTGGACTTTCACCCACCGCCAAACTCCTCGCCAGCGAGGAGGCGGGAAAGTC
CCAAAGATGACGTGACGGTGACGTCACAGTTAATTCACGACCAGTCACTCTTCTACCGTT
TTTTGCTTTAAATATTTCTATATATACACTTTACTGCTCTGTATCATTTTATATTCACCG
CTGAAGCAAATCGAATCAAAATCTTACGCAGCGCTGATCCATACATACGCTGTAATACTT
AATCCTCGATTTTGCAGGTATTCCATGTAATATAGTTTTATGATCCAACTGTCGCTGTTT
AAGCCTAAATTCTTTTTTCATGACTTAGAAATTTGGGTAATTGCAATCATACAGTTCAAG
AAGCAAATTCAGTTCAAGCTGCTCGTTTTACAGTTATTTTTCTGTAATTTTCCATCACCA
TTTTGTTAGCCCGCATATAGTAAATGTAGACTAATGTTGCTCCGCTTTAAATTAAACAGT
GTTTTGAGCCATTGCTCCTGTACAAGAGCAACCATGATTGTGATCTTGATTAAACAATTT
TAAAACGTTTATGAATTTGTCAAGAAATCATGTTCACGTATAGTACTGTGGAGTAATAGA
GGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[57-97] 2.7E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[253-366] 4.06E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[257-370] 6.7E-37 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[259-363] 12.743 |
| SMART |
CH-domain (IPR001715) - T[261-361] 3.8E-20 |
| Pfam |
CH-domain (IPR001715) - T[261-366] 4.5E-19 |
| CDD |
CH-domain (IPR001715) - T[262-366] 5.28265E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 259 | 1.64E-78 |
| SMTL2_HUMAN | 52.047 % | 200 | 1.13E-59 |
| SMTL1_HUMAN | 63.551 % | 162 | 1.18E-45 |
