- Transcript 'KH2012:KH.L154.10.v3...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v3.A.SL7-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [477,279 / 494,550]
Amino acid sequence
Length: 403
>KH.L154.10.v3.A.SL7-1
VLSLVATMPVFQNAESERLPLRLLVQYYDSLSLEKAKKIHGTGTPEKSDAPEATMRYTLD
NLSSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAETGGVTKENTTKSWSATKTTS
TTTTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDVSSKSLADKYSLGSSYSSTR
KDMSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMPAPSAKDARKMFTAMDNSSN
KSTGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVDINNFSGSWASGMAFCALVH
NFFPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVEDMMIMGNRPDSKCVFTYVQ
SLYNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 1,755
>KH2012:KH.L154.10.v3.A.SL7-1
AGGTGTTGTCATTAGTAGCTACCATGCCTGTTTTTCAAAATGCTGAAAGCGAGAGATTGC
CATTACGTTTGCTAGTACAGTATTATGACAGCTTGTCGTTAGAAAAGGCGAAGAAAATTC
ATGGCACTGGTACACCAGAGAAATCCGACGCACCCGAAGCCACCATGCGGTACACGCTTG
ACAATCTTAGCTCAGTGACCGAAGAGGCAATCTTAGAGAAATTGTTGTACGAGGCTGAAG
AGTTTGACGACAGAAGGAAAATAAGGCGAGCTATTCGGGATTTGAGGAAGAAGAAAGCAG
AAACTGGCGGAGTTACAAAAGAAAATACAACCAAGAGTTGGTCGGCAACTAAAACTACGT
CAACCACCACCACACGAGCGCTACCTAACGGATCTCTGAAAACAGAGTCAAAAGAAACGA
CGTCCATCAGCGGATATCAACGAAAAACTGCGTCACCTCTGGGTAGCAAAAAAGATACCG
ATGTGTCGTCAAAGTCTTTAGCAGACAAATACTCGCTCGGGTCAAGCTATTCATCCACAC
GTAAAGACATGTCTTCAACTTCGACGAAAAAGGTCGGTAGCATTTTTGACCGAGAGGACG
CCGCTGCTTCCAAGCGCCCCCAAACGGACAAACGCCGCGAAGTGATGCGGAATCGATCAA
TGCCTGCTCCGTCTGCAAAAGACGCGCGAAAGATGTTCACAGCAATGGACAATTCATCCA
ATAAGTCTACTGGAGGTAAAAAAGTTGGACGTAGCCCGACATTTGTGGTCCCAAACGCGA
ACAACGTGAAACAAATGTTGCTCAAATGGTGCCAGGCAAAAACCAGAGGATATGACCATG
TTGACATCAACAACTTCAGTGGTAGCTGGGCAAGCGGTATGGCATTTTGTGCCCTCGTTC
ATAATTTCTTCCCGGAGGCCTACGACTACTCAACCCTTGACCCAAAAGCAAGAGCTAAAA
ACTTCACGCTGGCTTTCGACGCCGCAGAGAAATACGCTGACGCTGACCAATTACTTGACG
TTGAAGACATGATGATTATGGGCAACCGACCTGACAGCAAATGTGTCTTCACATACGTCC
AGTCTTTATACAACAAGTTACGTCGGTTCGAAAAGCCCCTGACCCCTCTTTCACCCACCT
TTAAAGTAATGGGTGGACTTTCACCCACCGCCAAACTCCTCGCCAGCGAGGAGGCGGGAA
AGTCCCAAAGATGACGTGACGGTGACGTCACAGTTAATTCACGACCAGTCACTCTTCTAC
CGTTTTTTGCTTTAAATATTTCTATATATACACTTTACTGCTCTGTATCATTTTATATTC
ACCGCTGAAGCAAATCGAATCAAAATCTTACGCAGCGCTGATCCATACATACGCTGTAAT
ACTTAATCCTCGATTTTGCAGGTATTCCATGTAATATAGTTTTATGATCCAACTGTCGCT
GTTTAAGCCTAAATTCTTTTTTCATGACTTAGAAATTTGGGTAATTGCAATCATACAGTT
CAAGAAGCAAATTCAGTTCAAGCTGCTCGTTTTACAGTTATTTTTCTGTAATTTTCCATC
ACCATTTTGTTAGCCCGCATATAGTAAATGTAGACTAATGTTGCTCCGCTTTAAATTAAA
CAGTGTTTTGAGCCATTGCTCCTGTACAAGAGCAACCATGATTGTGATCTTGATTAAACA
ATTTTAAAACGTTTATGAATTTGTCAAGAAATCATGTTCACGTATAGTACTGTGGAGTAA
TAGAGGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[58-98] 2.7E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[254-367] 4.06E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[258-371] 6.7E-37 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[260-364] 12.743 |
| Pfam |
CH-domain (IPR001715) - T[262-367] 4.5E-19 |
| SMART |
CH-domain (IPR001715) - T[262-362] 3.8E-20 |
| CDD |
CH-domain (IPR001715) - T[263-367] 5.34015E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 259 | 1.48E-78 |
| SMTL2_HUMAN | 52.047 % | 200 | 1.17E-59 |
| SMTL1_HUMAN | 63.551 % | 162 | 1.34E-45 |
