- Transcript 'Moocci.CG.ELv1_2.S12...' >
- Clone 'cicl026d09' >
- Transcript 'KH2012:KH.C1.83.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L154.10.v2...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v2.A.SL2-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [466,163 / 494,550]
Amino acid sequence
Length: 654
>KH.L154.10.v2.A.SL2-1
FIWVNCYFKNTLDLKTQWRLLFAQAAGPDPVIERKDPGIGKRRFSRRFRKKSSNKSFDFS
EPAEEILSSDSLSPRSNESPRSDVSGAASPVATPSGSQRSSKSSARVILRVIGKKLFKSK
SQSYSPAPIGSPKSPSEKSTSPINSPTSQSPSVTSQKRTPVKTSSEIMAEVLARSRESAR
AVERDRFNVTEQAVADDYTSYSIEELQSMLNGTNDFVKRVEIRKVLKNKKNSSETGESYI
YHSSNIITISQVLSLVATMPVFQNAESERLPLRLLVQYYDSLSLEKAKKIHGTGTPEKSD
APEATMRYTLDNLSSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAETGGVTKENT
TKSWSATKTTSTTTTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDVSSKSLADK
YSLGSSYSSTRKDMSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMPAPSAKDAR
KMFTAMDNSSNKSTGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVDINNFSGSW
ASGMAFCALVHNFFPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVEDMMIMGNR
PDSKCVFTYVQSLYNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 2,506
>KH2012:KH.L154.10.v2.A.SL2-1
TTTATTTGGGTAAATTGTTACTTTAAGAATACATTGGATTTAAAAACACAATGGCGTCTG
CTGTTTGCCCAAGCCGCTGGCCCAGACCCAGTTATTGAGAGAAAAGATCCAGGCATCGGA
AAGAGGAGATTTTCTCGTCGATTCCGGAAGAAATCTTCAAATAAGAGCTTCGACTTTTCG
GAACCGGCGGAGGAAATTTTAAGTTCTGATTCTTTGTCGCCTAGGTCCAACGAAAGTCCA
AGGTCTGACGTCAGCGGCGCCGCTTCTCCCGTAGCAACACCTAGCGGTAGCCAAAGATCC
AGCAAAAGCTCCGCGCGAGTGATTCTGAGAGTCATCGGGAAAAAACTCTTTAAATCGAAA
TCCCAATCTTATTCTCCAGCGCCTATAGGGTCCCCCAAATCCCCAAGCGAGAAGTCGACG
TCACCTATAAACTCTCCCACGTCACAGAGCCCCTCTGTGACGTCACAAAAGAGAACCCCT
GTCAAAACTTCGAGTGAAATAATGGCAGAAGTTTTGGCTCGATCTCGGGAATCTGCGCGT
GCGGTGGAGCGTGACCGGTTCAACGTCACAGAGCAAGCCGTCGCGGATGATTACACCTCC
TACAGCATTGAGGAATTGCAGTCGATGTTAAACGGGACAAACGACTTCGTTAAAAGAGTT
GAAATTAGGAAAGTTTTAAAGAATAAAAAGAACTCAAGCGAAACAGGTGAGTCGTATATT
TATCACTCAAGTAATATTATTACAATTAGTCAGGTGTTGTCATTAGTAGCTACCATGCCT
GTTTTTCAAAATGCTGAAAGCGAGAGATTGCCATTACGTTTGCTAGTACAGTATTATGAC
AGCTTGTCGTTAGAAAAGGCGAAGAAAATTCATGGCACTGGTACACCAGAGAAATCCGAC
GCACCCGAAGCCACCATGCGGTACACGCTTGACAATCTTAGCTCAGTGACCGAAGAGGCA
ATCTTAGAGAAATTGTTGTACGAGGCTGAAGAGTTTGACGACAGAAGGAAAATAAGGCGA
GCTATTCGGGATTTGAGGAAGAAGAAAGCAGAAACTGGCGGAGTTACAAAAGAAAATACA
ACCAAGAGTTGGTCGGCAACTAAAACTACGTCAACCACCACCACACGAGCGCTACCTAAC
GGATCTCTGAAAACAGAGTCAAAAGAAACGACGTCCATCAGCGGATATCAACGAAAAACT
GCGTCACCTCTGGGTAGCAAAAAAGATACCGATGTGTCGTCAAAGTCTTTAGCAGACAAA
TACTCGCTCGGGTCAAGCTATTCATCCACACGTAAAGACATGTCTTCAACTTCGACGAAA
AAGGTCGGTAGCATTTTTGACCGAGAGGACGCCGCTGCTTCCAAGCGCCCCCAAACGGAC
AAACGCCGCGAAGTGATGCGGAATCGATCAATGCCTGCTCCGTCTGCAAAAGACGCGCGA
AAGATGTTCACAGCAATGGACAATTCATCCAATAAGTCTACTGGAGGTAAAAAAGTTGGA
CGTAGCCCGACATTTGTGGTCCCAAACGCGAACAACGTGAAACAAATGTTGCTCAAATGG
TGCCAGGCAAAAACCAGAGGATATGACCATGTTGACATCAACAACTTCAGTGGTAGCTGG
GCAAGCGGTATGGCATTTTGTGCCCTCGTTCATAATTTCTTCCCGGAGGCCTACGACTAC
TCAACCCTTGACCCAAAAGCAAGAGCTAAAAACTTCACGCTGGCTTTCGACGCCGCAGAG
AAATACGCTGACGCTGACCAATTACTTGACGTTGAAGACATGATGATTATGGGCAACCGA
CCTGACAGCAAATGTGTCTTCACATACGTCCAGTCTTTATACAACAAGTTACGTCGGTTC
GAAAAGCCCCTGACCCCTCTTTCACCCACCTTTAAAGTAATGGGTGGACTTTCACCCACC
GCCAAACTCCTCGCCAGCGAGGAGGCGGGAAAGTCCCAAAGATGACGTGACGGTGACGTC
ACAGTTAATTCACGACCAGTCACTCTTCTACCGTTTTTTGCTTTAAATATTTCTATATAT
ACACTTTACTGCTCTGTATCATTTTATATTCACCGCTGAAGCAAATCGAATCAAAATCTT
ACGCAGCGCTGATCCATACATACGCTGTAATACTTAATCCTCGATTTTGCAGGTATTCCA
TGTAATATAGTTTTATGATCCAACTGTCGCTGTTTAAGCCTAAATTCTTTTTTCATGACT
TAGAAATTTGGGTAATTGCAATCATACAGTTCAAGAAGCAAATTCAGTTCAAGCTGCTCG
TTTTACAGTTATTTTTCTGTAATTTTCCATCACCATTTTGTTAGCCCGCATATAGTAAAT
GTAGACTAATGTTGCTCCGCTTTAAATTAAACAGTGTTTTGAGCCATTGCTCCTGTACAA
GAGCAACCATGATTGTGATCTTGATTAAACAATTTTAAAACGTTTATGAATTTGTCAAGA
AATCATGTTCACGTATAGTACTGTGGAGTAATAGAGGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[309-349] 5.1E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[505-618] 9.95E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[509-622] 1.5E-36 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[511-615] 12.743 |
| Pfam |
CH-domain (IPR001715) - T[513-618] 1.0E-18 |
| SMART |
CH-domain (IPR001715) - T[513-613] 3.8E-20 |
| CDD |
CH-domain (IPR001715) - T[514-618] 1.81515E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 260 | 6.83E-76 |
| SMTL2_HUMAN | 52.047 % | 201 | 1.87E-57 |
| SMTL1_HUMAN | 63.551 % | 164 | 4.12E-44 |