- Transcript 'Boleac.CG.SB_v3.S45....' >
- Transcript 'KH2012:KH.L154.10.v1...'
Transcript Model
Transcript Id
KH2012:KH.L154.10.v1.A.SL4-1
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
KhL154 [478,604 / 494,550]
Amino acid sequence
Length: 641
>KH.L154.10.v1.A.SL4-1
FQQIVKMFNRRSSLDDSSLESALERRRPRLSIAPKHDVIPEHDVKHNDVIRSRSSLLVRL
KSDDSPVPSITDGAGEFSFKPSPSYVPQTGATEAKCGVLKSKSLYATPRSGAIQRCSSVD
SLLSLGLRILEDSLKNPASGECSPSSNTDSIKEVDETPFDRDSDHDVIDFDVSGNCDVIT
SDEEICEESQNKNYISEEEKSSKNFSSKSDTPHIMTSQSSTCTSLDDVGATQCVCAETLR
QVALSNQELREETRQLRDDVRFLEEVMRKVIKHVGYGKPPIPDEKSDAPEATMRYTLDNL
SSVTEEAILEKLLYEAEEFDDRRKIRRAIRDLRKKKAETGGVTKENTTKSWSATKTTSTT
TTRALPNGSLKTESKETTSISGYQRKTASPLGSKKDTDVSSKSLADKYSLGSSYSSTRKD
MSSTSTKKVGSIFDREDAAASKRPQTDKRREVMRNRSMPAPSAKDARKMFTAMDNSSNKS
TGGKKVGRSPTFVVPNANNVKQMLLKWCQAKTRGYDHVDINNFSGSWASGMAFCALVHNF
FPEAYDYSTLDPKARAKNFTLAFDAAEKYADADQLLDVEDMMIMGNRPDSKCVFTYVQSL
YNKLRRFEKPLTPLSPTFKVMGGLSPTAKLLASEEAGKSQR
Nucleotide sequence
Length: 2,511
>KH2012:KH.L154.10.v1.A.SL4-1
TCTTTCTTTTTTATCTTCAATTCGTCTTTGGTATGAAGGTCTAATTTCAACAAATTGTTA
AAATGTTCAACCGACGGTCCAGCTTGGACGATAGCTCGCTAGAGAGCGCCCTTGAACGTC
GCCGCCCCAGACTCTCGATTGCTCCAAAACATGACGTCATTCCCGAGCATGACGTCAAGC
ATAATGACGTCATCAGGTCAAGATCTAGTTTACTGGTACGTCTAAAATCTGACGACAGTC
CGGTGCCAAGTATAACTGATGGCGCTGGCGAATTTTCTTTTAAACCTTCGCCTAGTTATG
TGCCACAAACCGGCGCCACGGAAGCAAAGTGTGGCGTCTTGAAATCTAAGAGTTTATACG
CCACGCCACGATCAGGCGCCATACAAAGATGCTCCAGTGTCGACTCTCTTCTTTCTCTTG
GTCTCCGAATCCTGGAGGACTCTCTTAAAAATCCTGCATCCGGAGAATGCTCTCCATCTT
CTAACACTGATTCAATTAAAGAAGTAGACGAGACACCATTCGATAGGGACAGCGATCATG
ACGTCATAGACTTTGACGTAAGCGGTAACTGTGACGTCATTACTTCGGACGAAGAAATTT
GTGAAGAATCTCAAAACAAAAATTATATTTCGGAAGAAGAAAAATCTTCCAAAAACTTTT
CATCTAAAAGCGACACTCCGCATATTATGACGTCACAGTCCTCAACATGTACGTCACTGG
ATGACGTCGGCGCCACACAATGCGTTTGCGCGGAAACGCTACGTCAGGTTGCCCTTAGCA
ACCAAGAGCTCAGAGAAGAGACTCGCCAGTTACGTGATGACGTTCGGTTTCTTGAGGAGG
TCATGAGAAAGGTCATCAAACACGTGGGGTATGGAAAACCCCCGATCCCAGACGAGAAAT
CCGACGCACCCGAAGCCACCATGCGGTACACGCTTGACAATCTTAGCTCAGTGACCGAAG
AGGCAATCTTAGAGAAATTGTTGTACGAGGCTGAAGAGTTTGACGACAGAAGGAAAATAA
GGCGAGCTATTCGGGATTTGAGGAAGAAGAAAGCAGAAACTGGCGGAGTTACAAAAGAAA
ATACAACCAAGAGTTGGTCGGCAACTAAAACTACGTCAACCACCACCACACGAGCGCTAC
CTAACGGATCTCTGAAAACAGAGTCAAAAGAAACGACGTCCATCAGCGGATATCAACGAA
AAACTGCGTCACCTCTGGGTAGCAAAAAAGATACCGATGTGTCGTCAAAGTCTTTAGCAG
ACAAATACTCGCTCGGGTCAAGCTATTCATCCACACGTAAAGACATGTCTTCAACTTCGA
CGAAAAAGGTCGGTAGCATTTTTGACCGAGAGGACGCCGCTGCTTCCAAGCGCCCCCAAA
CGGACAAACGCCGCGAAGTGATGCGGAATCGATCAATGCCTGCTCCGTCTGCAAAAGACG
CGCGAAAGATGTTCACAGCAATGGACAATTCATCCAATAAGTCTACTGGAGGTAAAAAAG
TTGGACGTAGCCCGACATTTGTGGTCCCAAACGCGAACAACGTGAAACAAATGTTGCTCA
AATGGTGCCAGGCAAAAACCAGAGGATATGACCATGTTGACATCAACAACTTCAGTGGTA
GCTGGGCAAGCGGTATGGCATTTTGTGCCCTCGTTCATAATTTCTTCCCGGAGGCCTACG
ACTACTCAACCCTTGACCCAAAAGCAAGAGCTAAAAACTTCACGCTGGCTTTCGACGCCG
CAGAGAAATACGCTGACGCTGACCAATTACTTGACGTTGAAGACATGATGATTATGGGCA
ACCGACCTGACAGCAAATGTGTCTTCACATACGTCCAGTCTTTATACAACAAGTTACGTC
GGTTCGAAAAGCCCCTGACCCCTCTTTCACCCACCTTTAAAGTAATGGGTGGACTTTCAC
CCACCGCCAAACTCCTCGCCAGCGAGGAGGCGGGAAAGTCCCAAAGATGACGTGACGGTG
ACGTCACAGTTAATTCACGACCAGTCACTCTTCTACCGTTTTTTGCTTTAAATATTTCTA
TATATACACTTTACTGCTCTGTATCATTTTATATTCACCGCTGAAGCAAATCGAATCAAA
ATCTTACGCAGCGCTGATCCATACATACGCTGTAATACTTAATCCTCGATTTTGCAGGTA
TTCCATGTAATATAGTTTTATGATCCAACTGTCGCTGTTTAAGCCTAAATTCTTTTTTCA
TGACTTAGAAATTTGGGTAATTGCAATCATACAGTTCAAGAAGCAAATTCAGTTCAAGCT
GCTCGTTTTACAGTTATTTTTCTGTAATTTTCCATCACCATTTTGTTAGCCCGCATATAG
TAAATGTAGACTAATGTTGCTCCGCTTTAAATTAAACAGTGTTTTGAGCCATTGCTCCTG
TACAAGAGCAACCATGATTGTGATCTTGATTAAACAATTTTAAAACGTTTATGAATTTGT
CAAGAAATCATGTTCACGTATAGTACTGTGGAGTAATAGAGGATACCGTTA
| Pfam |
SMTN (IPR022189) - T[296-336] 4.9E-10 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[492-605] 9.82E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[496-609] 1.5E-36 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[498-602] 12.743 |
| SMART |
CH-domain (IPR001715) - T[500-600] 3.8E-20 |
| Pfam |
CH-domain (IPR001715) - T[500-605] 9.9E-19 |
| CDD |
CH-domain (IPR001715) - T[501-605] 1.7716E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 44.058 % | 258 | 5.28E-75 |
| SMTL2_HUMAN | 52.047 % | 199 | 3.5E-57 |
| SMTL1_HUMAN | 63.551 % | 162 | 1.2E-43 |