Aniseed - Transcript Card

Transcript 'KH2012:KH.L153.29.v2...'

Transcript Model

Transcript Id

KH2012:KH.L153.29.v2.A.SL3-1

Possible name(s)

FGG; ITLN1; ITLN2

Gene model

KH2012:KH.L153.29

Location

KhL153 [402,268 / 412,618]

Sequences

Amino acid sequence

Length: 625

>KH.L153.29.v2.A.SL3-1
TANCYSLVMGDAFKSNTNRVPEVQYEDDLGEGIYSNDIEPQNTGTVALPALPKTTKPLDQ
KKKHPIRFWRVFVCVVLIVIIVIAVIIIHLTFGRKPSLAQSNTQEVAEQQQQIAYGTLNN
PALSCLDLKNSTEVTTDGYYYLKPLGTLIPFQVYCDMTTAGGGWTLVASVHENDIDRKCS
TGDMWFSNDQPEYTMSRNWENRNTFGRVDQATSADYKNIGYSSMKASNVMLRHVPNKTPV
PRTAVEAGLQYHTSNNFLESLGGNLFSTYTQHYPMNPKTSVAYPPVSDLANAIAALAPNI
TAGIPDFYNYDYGSRSNTLRDGGNGTFSTYGMKISFQFSAGRSIHYDQEYKFIDTNTAMT
SRKSHPFILVAAIENHNFKRFGYYRIRSQRAEGDLLMSYNGKITDGNFELQYRARCFYGR
TVPSVCDVVFAVNNTKDWFSSTTFYLSDRSIKSYRSFRYDCYIFNYARRVMFGYTMLSRS
MGLLVTQPQMETALRKILQPFKNYTWPGQCESNHLVVPVTYTTGESNLSNFVPPYMHSAT
TTGFLQIRAESYDGTYFAMCPAVRLNNCDGQFVCIGGVKNGYSTSNACNDLTDWNGIANN
PDNHISKKYAHSKADIKSTIMIFYR

Nucleotide sequence

Length: 2,074

>KH2012:KH.L153.29.v2.A.SL3-1
TAAGCGTACACTTCGTTAAACTGCAAACTGCTATTCTTTAGTAATGGGAGACGCTTTTAA
ATCTAATACAAACCGCGTGCCAGAAGTGCAGTATGAAGACGACTTAGGCGAAGGTATATA
TTCAAATGATATTGAACCACAAAATACAGGCACAGTTGCACTACCAGCCCTACCAAAAAC
GACCAAGCCATTGGATCAGAAGAAAAAACACCCTATAAGATTTTGGCGAGTTTTTGTTTG
TGTCGTACTGATTGTAATTATTGTTATTGCAGTAATTATAATTCATCTTACATTTGGACG
AAAGCCATCATTGGCACAAAGTAACACCCAGGAAGTGGCAGAACAACAACAACAAATTGC
ATATGGAACTTTAAACAACCCAGCACTGTCTTGTCTGGATCTTAAGAATTCTACTGAAGT
AACGACAGATGGATATTACTATTTAAAACCGCTGGGTACTCTTATACCATTTCAAGTCTA
TTGTGATATGACAACTGCTGGCGGTGGGTGGACATTAGTAGCATCTGTTCATGAGAATGA
TATAGATAGGAAATGTTCAACAGGAGATATGTGGTTTAGTAATGACCAACCAGAATATAC
AATGTCCAGAAATTGGGAAAATAGAAATACATTTGGAAGGGTAGACCAAGCTACTTCAGC
TGATTATAAAAACATTGGATATTCGTCCATGAAGGCATCTAATGTAATGTTACGCCATGT
ACCAAATAAAACACCTGTCCCGAGAACAGCAGTGGAAGCTGGATTACAATATCATACCAG
CAATAATTTCCTTGAATCTCTTGGTGGTAATCTGTTCTCTACATACACTCAGCACTACCC
CATGAACCCAAAAACATCAGTTGCATACCCTCCTGTATCTGACTTAGCTAATGCAATAGC
TGCTCTTGCCCCCAATATAACTGCAGGGATACCAGATTTTTACAACTATGATTATGGTTC
AAGAAGTAACACATTAAGAGATGGTGGAAATGGAACGTTTTCTACATATGGCATGAAGAT
TTCTTTTCAATTTAGTGCTGGGCGCTCAATACACTATGATCAGGAATATAAATTTATTGA
TACTAATACTGCGATGACCAGCAGGAAATCTCATCCATTTATTCTTGTAGCTGCCATAGA
AAATCACAATTTTAAACGTTTTGGATATTATCGGATTCGAAGCCAAAGAGCTGAGGGAGA
TCTGCTTATGTCATACAATGGTAAAATTACAGATGGTAATTTTGAGCTTCAATACAGAGC
TAGGTGTTTTTATGGAAGAACTGTTCCAAGTGTTTGTGATGTTGTATTTGCAGTTAATAA
TACCAAGGATTGGTTTTCATCAACCACATTTTATTTGTCAGATAGAAGTATCAAGTCTTA
TAGGTCTTTTCGGTATGATTGTTATATATTTAATTACGCAAGAAGAGTTATGTTTGGATA
CACAATGCTTTCAAGATCTATGGGACTTCTTGTTACCCAACCTCAAATGGAAACAGCCCT
TAGAAAAATTCTGCAACCATTTAAAAACTACACCTGGCCAGGCCAATGTGAGTCCAATCA
TCTAGTAGTACCGGTGACATACACAACTGGTGAATCTAACTTAAGCAACTTTGTCCCACC
TTACATGCATTCTGCAACTACCACTGGATTTTTACAGATTCGTGCTGAATCATATGATGG
AACTTATTTTGCTATGTGTCCTGCTGTTAGATTAAACAACTGCGATGGCCAATTTGTTTG
TATTGGTGGTGTAAAAAATGGTTATTCGACGAGTAATGCATGCAATGACTTAACTGATTG
GAATGGTATTGCAAACAATCCAGATAACCACATCAGTAAAAAATATGCACACTCAAAAGC
AGATATTAAATCAACCATCATGATCTTTTACCGTTGAAAACGTGTTTTCATTTTTATTAG
CTTATTTTCTTCCAATTAAATGTAAATATGTTTTAACTGTAAGCGTGTTTTAACAACTCT
TGATTTGTCGCAATATCCTGTCTTTTCGTTTACAATATTTATAAATCTGCGCTGCTGTAA
TCAAAGAGACAAATAAAAGTTACTATTATTATTA

InterProScan

Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[93-221] 1.0E-10
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[115-276] 4.93E-25
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[116-174] 14.448
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[135-171] 2.0E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ITLN2_HUMAN	42.541 %	140	5.35E-37
ITLN1_HUMAN	44.444 %	136	1.04E-35