- Transcript 'KH2012:KH.C8.74.v3.A...' >
- Transcript 'KH2012:KH.C8.74.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L5.9.v1.A....' >
- Transcript 'KH2012:KH.L153.24.v1...'
Transcript Model
Transcript Id
KH2012:KH.L153.24.v1.A.ND1-1
Possible name(s)
AC079594.2; TRIM55; TRIM63
Gene model
Location
KhL153 [610,742 / 614,970]
Amino acid sequence
Length: 333
>KH.L153.24.v1.A.ND1-1
IQRNNLLNMTMRSENMYTTIRTNDFLSSQGRSSTISKGYRSISKAITDTTRGRTSRATEF
FDELPKELQCPKCGDLFDRPVLLSCSHTLCMDCAEDAIEYAELELKQRRRFSCPICRSAI
KYNATGIESLPRNINIEEAVARFKKEGKSHYPVCDQHAAFKMEMLMWCEECKVNICPLCA
VGDEHKQHKITPMQVVEKFQRIKRRLKNTKDALNEEIDVLGESIVKQQKIVYDLNEKAKE
LRLKVDQECDEMIAQIEKRRKSMYADVDKALNGKREKPDKKIETLRSQFTKMQVLTIQIQ
EVLEVKDAKDFIDTFNINGLPGKLQDMGKYIQS
Nucleotide sequence
Length: 1,797
>KH2012:KH.L153.24.v1.A.ND1-1
CTTTTTTACAGTTTCAAGTTAGCTAAAAAAAAGATACATTACATACAGTTTTTGGACAAT
TGCATTTTAGCGAATCGAGTTATTTGTTTTTGAAATTAGTCTACTGTTATCGGTTTTTGA
ATTCAAAGGAATAACTTGTTAAATATGACTATGCGGTCAGAAAACATGTACACGACCATA
CGTACAAATGATTTCTTAAGTTCACAAGGAAGAAGTTCGACTATCAGCAAAGGCTATCGT
TCCATCAGCAAAGCCATAACAGATACTACACGTGGTAGGACCAGTAGAGCTACCGAGTTT
TTTGATGAACTGCCTAAAGAACTTCAGTGCCCTAAATGTGGCGATCTATTCGACAGGCCA
GTCTTATTATCTTGTTCTCATACTTTATGTATGGACTGTGCTGAAGATGCAATAGAATAT
GCAGAACTCGAATTAAAGCAACGCAGACGATTTTCCTGTCCGATATGTAGAAGTGCGATC
AAGTACAATGCTACTGGTATAGAAAGCCTACCCCGAAACATAAACATTGAAGAGGCCGTG
GCGAGATTCAAAAAAGAGGGAAAATCTCACTATCCTGTATGTGACCAACATGCGGCGTTT
AAAATGGAAATGCTTATGTGGTGTGAAGAATGTAAAGTGAATATTTGCCCTCTGTGTGCG
GTGGGGGATGAACATAAGCAACATAAAATAACACCAATGCAAGTCGTGGAAAAATTCCAA
AGAATAAAAAGGCGATTGAAAAACACGAAAGATGCGCTGAACGAAGAAATTGATGTATTA
GGCGAATCAATAGTTAAACAACAGAAAATCGTGTACGATCTAAATGAAAAAGCGAAGGAG
CTTAGATTAAAGGTTGATCAAGAGTGCGATGAAATGATCGCACAAATTGAAAAGCGAAGA
AAATCGATGTACGCAGATGTAGATAAGGCGCTAAATGGTAAAAGAGAAAAACCAGACAAG
AAAATTGAGACTCTACGAAGCCAATTCACGAAGATGCAAGTCTTAACTATTCAAATACAA
GAAGTTCTAGAAGTTAAAGATGCAAAAGATTTCATTGACACGTTTAACATAAATGGCCTT
CCAGGAAAATTGCAAGATATGGGAAAATACATTCAAAGTTAAGAAGAACGTATTTTTTGA
AAGTATAATTGTGTTAGATTTTTACTGTGAAAGTTTCAAAGTTTTCCTGTATTTCTCTCA
AAAGTATACCCAAAAAACCTAAGGTAGTCTACGTTAAGTGCTAAACTTAACTGATGTATT
TAAAACATGCATATATAATTAAGTATAAACAAGAGAGCGTATCTTTAGTAAGTGAGTACG
TAATAAACTATTTAAAACAATCTTAGTTACCCCTTTAATTATAACGGTCGTCTAAGCTTG
ATTAAAAACAAACGAAAAGAAGTAACTAATAAATCGGTTTTCAGTCGGTAATGGTGACTG
TGGAGCAGTAGGTAGAAGGCATTAATGCATGTATTATAACTCACGTAAACGAATGATGTA
TTAAGTTGGTAAATACGCTTTGTACAACCTCAGCACCATGTGTTGAAATATAAACTTAAA
CTAGTTAATCCTGTCCCCAATATAATGAAAAATAGATTGATACCGATGCGTCAATTGTTG
TCCAGATTTTATCCAGCTTTATAGTTGCATTGAGTGCCATCAATGGTTATGTCTAAAACA
GATTGAAAGCAAATGCTATCCCAAACAGCTTTTCTTTGAAGTCCTTAATACATATTATCC
AGCTATTTAGCTAGTAAACAAAAACTTAAATCCGTTGCTTGTAGCTTATGTGATAGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[23-148] 1.2E-17 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[70-117] 11.221 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[70-114] 5.6E-9 |
| SMART |
Znf_RING (IPR001841) - T[70-116] 2.2E-4 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[85-94] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[149-193] 10.708 |
| Pfam |
Znf_B-box (IPR000315) - T[151-192] 2.1E-6 |
| CDD |
Znf_B-box (IPR000315) - T[152-193] 7.1879E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI54_HUMAN | 25.61 % | 85.5 | 1.05E-18 |
| TRI63_HUMAN | 27.049 % | 89 | 5.81E-20 |
| TRI55_HUMAN | 28.251 % | 89.7 | 7.77E-20 |