- Clone 'cien47025' >
- Clone 'cien175326' >
- Transcript 'KH2012:KH.L152.25.v1...'
Transcript Model
Transcript Id
KH2012:KH.L152.25.v1.A.ND1-1
Possible name(s)
ZNF454; ZNF528; ZNF845
Gene model
Location
KhL152 [255,717 / 257,720]
Amino acid sequence
Length: 242
>KH.L152.25.v1.A.ND1-1
ILMYFQYIPKDFEITPTVRGKVKLYRMSKVTSVSKKSSAKAEEKDNCCKYCDKVFRFPSK
LVIHLRTHTGEKPFQCYICDKSFTTNNSLECHQRIHTGGKPYKCDICDEPFTKNYSLKCH
RRIHTREQRYTCNICDKPFTRNGSLIYHQRIHTGEKRYTCNICDKPFTRNDSLSRHQRIH
TGEKPYKCDICKKLFTTNGNLSSHQKVHTGKEPYKCDICDKLFSSNCNLRRHQRTHTDEK
PC
Nucleotide sequence
Length: 2,003
>KH2012:KH.L152.25.v1.A.ND1-1
ATTGCATGAGCTATCTTAACCTTCTTTGGTTTGATTTGTATTTAGTAGATCTTGATGTAT
TTTCAATACATACCTAAGGATTTTGAAATAACTCCAACAGTTAGGGGTAAAGTGAAACTG
TACAGAATGTCAAAAGTCACTTCAGTGTCAAAGAAATCCAGTGCAAAAGCTGAAGAGAAG
GATAATTGCTGCAAATACTGTGACAAAGTATTTCGTTTTCCTTCAAAGCTTGTTATTCAC
TTGAGGACACATACTGGAGAAAAACCCTTTCAATGCTACATTTGTGACAAATCATTTACT
ACAAATAATAGCTTAGAATGTCACCAAAGAATCCACACTGGTGGAAAGCCATACAAATGC
GACATTTGTGATGAACCATTTACTAAAAATTATAGCTTAAAATGCCACCGAAGAATACAC
ACCCGTGAGCAGCGATACACATGCAATATTTGTGACAAACCATTTACTAGAAATGGTAGT
TTAATATATCACCAAAGAATTCACACCGGTGAGAAGCGATACACATGTAATATTTGTGAC
AAACCATTTACTAGAAATGATAGTTTAAGTCGTCACCAAAGAATTCACACTGGTGAGAAG
CCATACAAATGCGACATTTGTAAAAAACTATTTACCACTAATGGTAACTTGAGCAGCCAC
CAAAAAGTCCACACTGGTAAGGAGCCATACAAATGCGACATTTGTGACAAATTGTTTTCT
TCAAATTGTAACTTAAGGCGTCATCAAAGAACTCACACTGATGAGAAGCCATGTTAATGC
AAAACTAGTATAAAAACTTTTAGAAATCGAGGAAATGTAAACAGCAGTAAAAGATGTATT
TACCCGAAACCAACGACAAGAATATACTGAAGTTTTACCAGTTAAATTCATTCTGTACTT
TTCTAACCACTACCTTACCTTATTTACTGTCAAATTTCCCTGTGATGTTGTGGTGACATT
TTTTGTTACAAGGCTACTCATTATGTTGTTAAACTTTCAATATTTGTTTTGTTAATTTAA
AGTGAAGTTGGTTCAATTTATTGTTTGTGTTGCCTGATAGCACAAAACACTGGGTTCTAT
TGTGTTCATGACCATGTACTTTATAAAAACCTACTTTACAATCTAAATCTTTGTTTTAAT
CCAATGCCAGTTTTTAACTTACTAAATTACACAAAAGGACAGGATTTTACCGATTATCGG
CAAGAGCAAAAAAATGGCCGATATTATCAGCGCTAAGTAACCAAACGGCCAGCAACGTGT
GTACGTAAGAATTAATGCAGAGCGCTACCTTGTTCATAAACGTTAACTCATTCGTATACC
TACTTCAACTCGTTAGTAACAATCTAACGTATTAAACTCGGTCAAAGCTACAGTAATTTA
CAAAATATCGGCACGCTAATCAAAATCATACAAAACACGTGGCTTACGTTCAAACGCTGC
TTGATAAAGAGAAGACGCGTTTTATGAATTCCAGTGTGGCAAGATGCAGAAATCATATAA
AAAATGATATTATTAACAGAAGTTTTTACGGTGGATAATAAGCGAGCTACATTGCCGCTC
ACTTAGTATTACTATATTTTCTCCTATGTTCCAACTACGATATGTAAATACGATATTTTA
AGCGCACGTCCTCCAGACAAACCTGCGCGGGAGAGATTTTAAGTGCGTGAGTTAGCACTT
CTATTATTAATTTTATTGGGGATGATGACGTACCCGCTCGCACCCCCAGTGTCCGCCGTT
GTTTTTTAGTTATATGTGATATTTCCGTTAGTGTTTTGGCCACCTGTAGTTATTATTAAT
ATTGTAAACGTTTTCTTTCAGATTACTTAGGTCTTTGAAATTTGTTGTGTTTTATAATGT
GTAAAGTTAAGTGTATGCCCAGGATCACACGCTGACAATGATAGCAACATCGAGCCTCGA
ACCTGTAATAACTTCATTCCAACAATTGGTGTACCTAAGATATGTATACTGTGCCATTAA
TAGCATTACAAGTTCCTCCAAAA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[46-73] 14.004 - T[74-101] 15.417 - T[102-129] 13.027 - T[130-157] 15.417 - T[158-185] 17.35 - T[186-213] 15.417 - T[214-241] 16.394 |
| SMART |
Znf_C2H2_type (IPR013087) - T[46-68] 0.35 - T[74-96] 0.024 - T[102-124] 0.061 - T[130-152] 6.1E-4 - T[158-180] 3.4E-4 - T[186-208] 0.001 - T[214-236] 2.8E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[47-68] . - T[76-96] . - T[104-124] . - T[132-152] . - T[160-180] . - T[188-208] . - T[216-236] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[47-96] 3.63E-16 - T[82-139] 2.25E-18 - T[139-195] 1.83E-23 - T[195-241] 8.71E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN845_HUMAN | 46.552 % | 222 | 8.6E-67 |
| ZN454_HUMAN | 50.481 % | 216 | 3.24E-67 |
| ZN528_HUMAN | 54.639 % | 218 | 2.95E-67 |
