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  1. Transcript 'KH2012:KH.C1.313.v1....'
  2. Transcript 'KH2012:KH.L149.21.v2...'
  3. Transcript 'KH2012:KH.C1.508.v3....'
  4. Transcript 'KH2012:KH.L152.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.L152.2.v1.A.nonSL4-1

Possible name(s)

ISL1; ISL2; LHX9

Location

KhL152 [106,302 / 116,974]

Sequences

Amino acid sequence

Length: 458

>KH.L152.2.v1.A.nonSL4-1
RERVRTIYCDVIIASNIGVEGEYPALQAENFEISNLDPGYSPPLADDSRSGSFTSFMNES
FAIFGQDEKLGAKMADPHGGCVSASLNCDPCRIPLCVGCGSPIHDQYILRVAPNLEWHAG
CLKCADCGQYLDETCTCFVRDGKTYCKRDYTRLFGTKCNKCGLCFSKNDFVMRARDKIYH
IQCFKCVACSRQLIPGDEFALRDDGLFCKADHEVATSGDMMVHDGHMIPGIPQTPNPQGV
ISPQMGGERVISHRSGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMK
EQLTEMTGLSSRVIRVWFQNKRCKDKKRSIALKQIQEQQAKQQHNNEQGNNVQGLSGMNG
VPMVASEPVRNDNSVSVAPVEVRNYQQPAWKALSDFALQSEIEQPAFQQLMNNFSDQGQG
SISDSSEISSIPSVSSASMDSTTCSTPHTVESTVPACS

Nucleotide sequence

Length: 1,829

>KH2012:KH.L152.2.v1.A.nonSL4-1
AACTTGTGTCTGTGACGTGAGCGAGTGAGGACAATTTACTGTGACGTCATAATAGCCAGC
AATATAGGGGTGGAAGGTGAATACCCCGCTCTACAAGCGGAGAATTTCGAAATTTCAAAC
CTGGATCCCGGATACTCGCCGCCGTTGGCGGACGACTCAAGGTCGGGGTCGTTCACAAGT
TTTATGAACGAATCATTCGCCATTTTCGGTCAGGACGAGAAACTGGGAGCAAAGATGGCG
GACCCTCATGGAGGCTGCGTGTCGGCCTCGCTTAATTGCGACCCCTGCCGCATCCCTCTA
TGCGTAGGATGTGGCTCCCCTATACACGACCAATACATACTACGTGTCGCTCCCAACCTT
GAGTGGCATGCTGGTTGCTTAAAATGCGCTGATTGTGGTCAATACTTGGACGAGACGTGC
ACGTGTTTTGTAAGGGATGGGAAAACGTATTGTAAACGGGATTACACAAGGTTATTCGGA
ACAAAATGCAACAAGTGTGGTCTCTGCTTCAGTAAGAACGACTTTGTAATGCGAGCCAGA
GACAAGATATATCACATACAATGTTTTAAGTGTGTGGCTTGTAGCAGGCAGTTAATACCA
GGGGACGAATTCGCTCTAAGAGACGACGGTTTGTTCTGCAAAGCTGACCATGAAGTTGCA
ACATCCGGGGACATGATGGTTCACGACGGCCACATGATTCCGGGAATTCCCCAAACCCCG
AACCCTCAAGGGGTCATCAGCCCTCAAATGGGGGGCGAGAGGGTGATCAGCCATCGGTCG
GGTGGGCACAGTGGGGGGCAAAGGCGAAGCAAAGATGCGAAGACGACGCGAGTTAGGACA
GTGCTCAACGAGAAACAACTCCACACGCTTAGAACTTGTTACGCGGCCAACTGTCGACCT
GACGCTCTAATGAAAGAACAACTCACAGAAATGACTGGACTATCTTCGCGTGTAATAAGG
GTTTGGTTCCAAAACAAAAGATGCAAAGACAAGAAACGTTCCATAGCTTTGAAACAAATC
CAGGAGCAGCAAGCGAAGCAACAGCATAATAACGAACAGGGTAATAACGTCCAGGGTTTA
TCAGGGATGAACGGAGTCCCCATGGTTGCATCAGAACCTGTAAGAAACGACAACTCAGTT
AGTGTAGCTCCTGTTGAAGTGAGGAACTACCAGCAACCAGCTTGGAAAGCACTCAGCGAC
TTTGCTCTTCAAAGCGAAATAGAACAACCGGCCTTCCAACAACTGATGAACAACTTTTCC
GATCAAGGTCAAGGCTCGATATCCGATTCGTCCGAAATCAGTAGCATTCCTTCAGTTTCC
TCAGCCAGCATGGATTCGACCACATGTTCCACCCCGCACACAGTCGAATCAACTGTACCG
GCGTGTAGCTAACACGACAAACAATTACAAACATTCATCATACGTTTGTGTAGATTCGTA
GTTTTTGTTAGACCCGCAATATTGTCCCATCTGCAAAATGCAACCAAAGAAGAAAATATT
CTTCTGGCAACTAACTTATATAAGCTGCTTAAAACTTAAGCGGCAAATTGTTTCCTTCCC
GGATCTTACACACAAGCCATAGGCAGTGTTGCCGAGTATTTAACGCAGTGTTGCCGATTG
TTCCAATTTTTGTGTTCCCAAGTAATATAAACCACGTCATTATGACGTCACAAAAATGAC
GTAGTTCCACGTCACAATCAAACCAACAAGCACAATCAACAAAAGACAAATCTCGTTATT
TTTAGATACGGTGCGTAGTATGCATGTCGTCTTATATTTTGTCTCATTGTGGTCGCAATT
TACAAAATAAAATCAAAAATAAAGAAAAA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[94-156] 14.603 - T[157-218] 10.86
SMART
Znf_LIM (IPR001781) - T[95-149] 8.2E-14 - T[157-211] 1.8E-12
Pfam
Znf_LIM (IPR001781) - T[96-153] 1.2E-13 - T[158-213] 1.8E-12
ProSitePatterns
Znf_LIM (IPR001781) - T[158-193] .
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[254-328] 6.84E-17
ProSiteProfiles
Homeobox_dom (IPR001356) - T[268-328] 15.337
SMART
Homeobox_dom (IPR001356) - T[270-332] 1.6E-17
Pfam
Homeobox_dom (IPR001356) - T[272-327] 1.0E-14
CDD
Homeobox_dom (IPR001356) - T[272-329] 1.2639E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ISL1_HUMAN 63.636 % 434 1.58E-151
ISL2_HUMAN 57.182 % 398 4.33E-137
LHX9_HUMAN 35.878 % 169 5.21E-48