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TRANSCRIPT CARD

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  1. Molecular Tool 'pFT::dnCi-FGFR' > 
  2. EST 'AHC0AAA228YO16_RM1' > 
  3. Molecular Tool 'Msxb-MO (Imai 2009)' > 
  4. Transcript 'Moocul.CG.ELv1_2.S12...' > 
  5. Transcript 'KH2012:KH.L147.12.v2...'

Transcript Model

Transcript Id

KH2012:KH.L147.12.v2.A.SL8-1

Possible name(s)

RPS21; TBCE

Gene model

KH2012:KH.L147.12

Location

KhL147 [309,299 / 311,083]

Sequences

Amino acid sequence

Length: 100

>KH.L147.12.v2.A.SL8-1
SPHPRSTIVTFYILDPTLPSIMQNDAGEVVDLYIPRKCSASGRIIGAKDHASVQLSFIDV
DETGRALTTAKPYTICGDIRRMGESDDCLNRLAKKDGIMS

Nucleotide sequence

Length: 623

>KH2012:KH.L147.12.v2.A.SL8-1
TCTCCCCCCACCCCAGGTCTACCATCGTAACTTTTTACATCTTGGACCCAACGTTGCCAT
CAATCATGCAGAACGACGCCGGTGAAGTAGTTGACCTTTATATCCCCCGAAAATGCTCGG
CAAGCGGACGAATCATCGGAGCCAAGGATCACGCGTCTGTACAACTATCATTCATTGATG
TAGATGAGACAGGACGTGCGCTCACCACTGCGAAACCTTATACCATCTGTGGCGATATCA
GAAGAATGGGCGAGTCAGATGACTGTCTGAACAGATTGGCGAAAAAAGACGGCATCATGT
CATGATCAGGCGATCTTCACAAGGCTCCTCGAAAATAAAAATTCAATTGAATTTTAATAT
GTGTTGCCTTTGAATTAAGTAACTTATCCTCACTAGACAGACTATGAACAGTCATAATAA
CACAGGTGTTCTTTTCATACCCTGCGTGGCTTAAAAGTTGTCACATATGTTACTTTGCGT
GACTTTTTGCGGTATGGGTAACAATTTTACAATCTGTAAGGAATCACCAGTTTGAAACAA
TTGCTACAAACTTATCCGCCCACAATGGTTGCAACGTCGACCCCGAAACGCTTATCTTAC
GGTTTTGAGACAGGCCAAGTTAT

InterProScan

Gene3D
Ribosomal_S21e_sf (IPR038579) - T[22-100] 4.6E-38
PANTHER
Ribosomal_S21e (IPR001931) - T[22-99] 7.7E-32
PIRSF
Ribosomal_S21e (IPR001931) - T[22-100] 2.1E-34
Pfam
Ribosomal_S21e (IPR001931) - T[22-99] 2.6E-39
ProSitePatterns
Ribosomal_S21e_CS (IPR018279) - T[32-40] .
ProDom
Ribosomal_S21e (IPR001931) - T[47-99] 2.0E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS21_HUMAN 70 % 113 1.6E-34