- Transcript 'KH2012:KH.L144.2.v5....' >
- Transcript 'KH2012:KH.L144.2.v7....' >
- Transcript 'KH2012:KH.L144.2.v6....'
Transcript Model
Transcript Id
KH2012:KH.L144.2.v6.A.SL4-1
Possible name(s)
CHD4; PHF21A; PHF21B
Gene model
Location
KhL144 [105,326 / 114,319]
Amino acid sequence
Length: 653
>KH.L144.2.v6.A.SL4-1
ILMAKLKETPKDEILRKELRDIQKHISELGAVQKQLSKAKSNEKKKVKDENNTTNIESKD
HTIVNGSSFIKIGSQDKTTSVGQLVQISSINYQQDIVSQPNQTSTTGVSILCNGGAKSPP
TKINFMKPHETKELTKVLISNGVIKPNTHTVLEITQQTNNPVLTNGKSPDHYQPLNLTKS
GSNSNNKLLKTLNNGNSVLLPLAPLGDLGALSPTNSANHPVKFRVPVTGKSGGRSIVLLS
TAKIHNDKPTFRLVSPRALRPNLASTPNITETFVQKQNHPKTNQTQVWLNMAATKEPSCF
VPIGNESKLTNSEVDLQNIKSLEKLSQKIVMTPKQTNYIASTSPDHLAPSPEIDASLDQD
DEKPSLPKSARNYAAVSTSQLNKHDFLSQLHLVPKERAERLRNRRYGRRKVAANPVYSGG
IYVSTSAAESAKRLLPPELLGLEDTVPAKRSRGRPRNSTKRSDITEEVSHIIEQAKPLKM
KTPLQDSSVIKTRVKRRSDSDPHNSGPCGVCQKSNGGLISCDTCGCSYHLHCTKPVMDQA
PTNMWFCVRCKHKFSDPSTASTWPGLQSIVHSYFTFEAERNAALQRARKRRDVLIDAEKK
LNDQVKALVSTIMNKVTKKYKVHDSVQNATDSYQRLLRGVETLKHLSEFAVTN
Nucleotide sequence
Length: 2,893
>KH2012:KH.L144.2.v6.A.SL4-1
ATCCTCATGGCAAAGCTAAAAGAAACGCCAAAGGATGAAATACTAAGAAAAGAGCTTCGA
GACATACAAAAACATATATCTGAGTTGGGTGCGGTTCAAAAGCAATTAAGCAAAGCTAAG
TCAAACGAAAAGAAAAAAGTTAAAGATGAAAATAACACAACGAATATAGAATCAAAAGAT
CACACGATTGTAAATGGAAGTTCATTCATAAAAATAGGATCTCAAGACAAAACTACGTCC
GTTGGACAACTGGTGCAAATTTCATCCATTAATTACCAACAAGACATAGTTTCTCAACCA
AACCAAACCAGCACGACTGGTGTTTCAATACTCTGCAATGGTGGTGCAAAGTCCCCACCC
ACAAAAATAAACTTTATGAAACCACATGAAACAAAAGAGTTAACAAAAGTGTTGATCAGT
AACGGAGTTATAAAACCAAACACTCATACAGTTCTAGAAATCACACAACAAACAAATAAC
CCAGTTCTCACAAATGGGAAATCACCTGACCATTACCAGCCTCTTAACTTAACGAAATCA
GGTTCAAATTCGAACAACAAACTTTTAAAAACTCTCAACAATGGGAATTCCGTTCTTCTT
CCTCTTGCGCCACTAGGTGACCTCGGAGCGCTGTCCCCGACGAACTCAGCCAATCATCCA
GTTAAGTTTAGGGTTCCAGTTACAGGGAAATCAGGCGGTCGTTCAATTGTTTTGCTTTCC
ACTGCAAAAATACATAACGACAAACCGACATTTAGGCTTGTATCTCCCCGTGCATTGCGA
CCAAACCTTGCCTCTACTCCAAATATTACGGAAACTTTTGTGCAGAAACAAAACCATCCG
AAAACAAACCAAACACAAGTATGGTTGAACATGGCAGCCACAAAAGAGCCGTCTTGTTTC
GTCCCAATTGGCAACGAATCAAAACTAACAAACAGTGAAGTTGATCTACAGAATATCAAG
TCATTGGAAAAACTGTCGCAGAAAATTGTGATGACTCCGAAACAAACTAATTACATTGCT
TCCACATCCCCGGACCATCTTGCCCCGTCTCCAGAAATCGATGCTTCCTTGGATCAAGAT
GACGAGAAACCATCGTTGCCGAAAAGCGCGAGAAACTACGCAGCTGTGAGCACCTCACAA
CTTAATAAACACGACTTCTTGTCCCAGTTGCACCTCGTGCCCAAGGAGCGCGCAGAGCGG
CTCCGAAACCGCCGATATGGCCGTCGAAAAGTAGCAGCGAATCCTGTATACAGTGGAGGT
ATCTATGTCTCCACTTCTGCTGCTGAATCTGCCAAAAGGTTGCTTCCACCTGAGTTGCTG
GGATTGGAGGATACAGTGCCCGCTAAACGATCAAGAGGTCGTCCACGTAATTCCACCAAG
CGTTCTGACATCACAGAAGAAGTGTCACACATTATTGAACAAGCAAAACCTTTGAAAATG
AAAACACCGTTGCAGGATTCGAGTGTCATTAAAACTCGTGTGAAACGAAGAAGTGATTCG
GATCCCCACAATAGTGGTCCATGCGGTGTATGCCAGAAGTCAAACGGTGGCCTTATATCA
TGTGATACATGCGGATGTTCATACCACTTACATTGCACTAAACCAGTGATGGACCAAGCG
CCAACTAATATGTGGTTCTGTGTTAGATGCAAACACAAGTTTTCCGACCCCTCTACCGCA
TCCACGTGGCCAGGACTTCAATCCATCGTTCATTCATATTTTACTTTCGAGGCCGAGCGC
AACGCAGCGTTGCAACGCGCACGTAAACGACGCGATGTATTAATCGACGCTGAGAAAAAA
CTAAACGACCAAGTTAAGGCACTTGTGTCAACTATAATGAATAAAGTTACTAAAAAGTAC
AAAGTCCACGACTCGGTACAAAACGCTACGGATTCTTATCAGAGGTTACTACGTGGGGTT
GAGACGCTTAAACATCTCTCTGAATTCGCTGTGACGAACTGAAGGTGCTTAGGACATCAA
ATTTCTGCGAAATGGTCAAAAATCACTGTAAATCGTGTGTAATCACTTCCGTATTGCTGT
TCATGTTGTTCACGCCTTGGTACGTCCGCACAACCCACACGTTTTAAAGCACAATCATTA
CTGTTATAGTAGGGTGGGGTAAATCGAGACATGTTTATTCTCTTTTTACGTCACATGGTA
GTAAACAAAAAATTATTTACAGAATTACGTTACTGTAGCCCCACGACCCTAAATGGTCGT
TGTTAAATGTTCAAAACATGATCAGGAAACAAGGGATTTAGGTATTACCGGTATTCCATC
TTACCACACAGTACTATATACGTTTGTCGCAGCGACCGCTTAAAAATAATAATTCTTTCC
AATATGATAAAGTATTTATGATTTTTGTCACGACACATTTGGCAAAATAAAAAGTCCCAT
ATTTTACAATTGTACAAAACACATGTTAAAACGTTCCCAAACTTTCTATAAATGGGCAAT
TATTCTAACTTTTCCATATATTGTTGACTAGTTTTTCCGCTTACAAGTGAAGTACAACAG
CACAGTAGTGTACTTCCGCATTTAACTTGGGAAAATTTGCCATTTTAAACCCATAAACTC
TTGGTCAAGCTATTCTGTTTCACACTTTTGCACTTTTATGTTTTCTGAGCACACGCATGC
GAAAGAAATATTACAATAGTTTATCTCGTAAAAATGAATTCATTTTAAAAAGTCAAAACA
ATTAAGTTTTTTTGTTCTTTATGAATATAAAGTACACCATAGGCGAAAAAATTGTGAATT
TTGGGGCTTTTTCTTTATCCAGACTGTGGAAATACTTTATTTTTTTCACGCTCGCAGTAT
TTTCGTTGCTTTTCCTTTTTTATCCGCACACCTTCAAGTTTTCGTTCTTCCAATAAAATA
ATTTCCAATTCAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[473-557] 9.7E-13 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[498-556] 4.87E-12 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[505-553] 9.526 |
| SMART |
Znf_PHD (IPR001965) - T[507-551] 7.8E-10 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[508-550] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[508-552] 1.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PF21A_HUMAN | 28.014 % | 106 | 6.13E-24 |