- Transcript 'KH2012:KH.C1.264.v3....' >
- Transcript 'KH2012:KH.L144.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.L144.2.v2.A.SL2-1
Possible name(s)
CHD4; PHF21A; PHF21B
Gene model
Location
KhL144 [105,326 / 115,587]
Amino acid sequence
Length: 696
>KH.L144.2.v2.A.SL2-1
CLSVKLLFCDILKGVYGTVQVTEDVMDLKQVQKLLKADILQHQILMAKLKETPKDEILRK
ELRDIQKHISELGAVQKQLSKAKSNEKKKVKDENNTTNIESKDHTIVNGSSFIKIGSQDK
TTSVGQLVQISSINYQQDIVSQPNQTSTTGVSILCNGGAKSPPTKINFMKPHETKELTKV
LISNGVIKPNTHTVLEITQQTNNPVLTNGKSPDHYQPLNLTKSGSNSNNKLLKTLNNGNS
VLLPLAPLGDLGALSPTNSANHPVKFRVPVTGKSGGRSIVLLSTAKIHNDKPTFRLVSPR
ALRPNLASTPNITETFVQKQNHPKTNQTQVWLNMAATKEPSCFVPIGNESKLTNSEVDLQ
NIKSLEKLSQKIVMTPKQTNYIASTSPDHLAPSPEIDASLDQDDEKPSLPKSARNYAAVS
TSQLNKHDFLSQLHLVPKERAERLRNRRYGRRKVAANPVYSGGIYVSTSAAESAKRLLPP
ELLGLEDTVPAKRSRGRPRNSTKRSDITEEVSHIIEQAKPLKMKTPLQDSSVIKTRVKRR
SDSDPHNSGPCGVCQKSNGGLISCDTCGCSYHLHCTKPVMDQAPTNMWFCVRCKHKFSDP
STASTWPGLQSIVHSYFTFEAERNAALQRARKRRDVLIDAEKKLNDQVKALVSTIMNKVT
KKYKVHDSVQNATDSYQRLLRGVETLKHLSEFAVTN
Nucleotide sequence
Length: 3,255
>KH2012:KH.L144.2.v2.A.SL2-1
TATAGATATATGTGTTGGTATATATATAGTATATATTGTACTACGCTTGCATCTATGTTT
AAAGCTATACTTAAACTTTGTTAGCACAAAAGACGTGTTCGAGGTACCACCAGCCCTTTT
TCTCTTATTGTCATTGACTGCTTGGTTTAGTGGTTCGGTGGCGCTACTCTATCAGAAAAT
AGTACGCTGCAAGGTGAAAGCTACATGTATAGGCCACGAGCGTCGTTTATTAGTGCCTAT
CGGTGAAATTATTATTTTGCGATATTCTAAAAGGAGTTTATGGTACAGTACAAGTTACAG
AAGACGTAATGGACTTAAAGCAAGTTCAAAAACTGCTCAAAGCAGATATATTGCAACACC
AGATCCTCATGGCAAAGCTAAAAGAAACGCCAAAGGATGAAATACTAAGAAAAGAGCTTC
GAGACATACAAAAACATATATCTGAGTTGGGTGCGGTTCAAAAGCAATTAAGCAAAGCTA
AGTCAAACGAAAAGAAAAAAGTTAAAGATGAAAATAACACAACGAATATAGAATCAAAAG
ATCACACGATTGTAAATGGAAGTTCATTCATAAAAATAGGATCTCAAGACAAAACTACGT
CCGTTGGACAACTGGTGCAAATTTCATCCATTAATTACCAACAAGACATAGTTTCTCAAC
CAAACCAAACCAGCACGACTGGTGTTTCAATACTCTGCAATGGTGGTGCAAAGTCCCCAC
CCACAAAAATAAACTTTATGAAACCACATGAAACAAAAGAGTTAACAAAAGTGTTGATCA
GTAACGGAGTTATAAAACCAAACACTCATACAGTTCTAGAAATCACACAACAAACAAATA
ACCCAGTTCTCACAAATGGGAAATCACCTGACCATTACCAGCCTCTTAACTTAACGAAAT
CAGGTTCAAATTCGAACAACAAACTTTTAAAAACTCTCAACAATGGGAATTCCGTTCTTC
TTCCTCTTGCGCCACTAGGTGACCTCGGAGCGCTGTCCCCGACGAACTCAGCCAATCATC
CAGTTAAGTTTAGGGTTCCAGTTACAGGGAAATCAGGCGGTCGTTCAATTGTTTTGCTTT
CCACTGCAAAAATACATAACGACAAACCGACATTTAGGCTTGTATCTCCCCGTGCATTGC
GACCAAACCTTGCCTCTACTCCAAATATTACGGAAACTTTTGTGCAGAAACAAAACCATC
CGAAAACAAACCAAACACAAGTATGGTTGAACATGGCAGCCACAAAAGAGCCGTCTTGTT
TCGTCCCAATTGGCAACGAATCAAAACTAACAAACAGTGAAGTTGATCTACAGAATATCA
AGTCATTGGAAAAACTGTCGCAGAAAATTGTGATGACTCCGAAACAAACTAATTACATTG
CTTCCACATCCCCGGACCATCTTGCCCCGTCTCCAGAAATCGATGCTTCCTTGGATCAAG
ATGACGAGAAACCATCGTTGCCGAAAAGCGCGAGAAACTACGCAGCTGTGAGCACCTCAC
AACTTAATAAACACGACTTCTTGTCCCAGTTGCACCTCGTGCCCAAGGAGCGCGCAGAGC
GGCTCCGAAACCGCCGATATGGCCGTCGAAAAGTAGCAGCGAATCCTGTATACAGTGGAG
GTATCTATGTCTCCACTTCTGCTGCTGAATCTGCCAAAAGGTTGCTTCCACCTGAGTTGC
TGGGATTGGAGGATACAGTGCCCGCTAAACGATCAAGAGGTCGTCCACGTAATTCCACCA
AGCGTTCTGACATCACAGAAGAAGTGTCACACATTATTGAACAAGCAAAACCTTTGAAAA
TGAAAACACCGTTGCAGGATTCGAGTGTCATTAAAACTCGTGTGAAACGAAGAAGTGATT
CGGATCCCCACAATAGTGGTCCATGCGGTGTATGCCAGAAGTCAAACGGTGGCCTTATAT
CATGTGATACATGCGGATGTTCATACCACTTACATTGCACTAAACCAGTGATGGACCAAG
CGCCAACTAATATGTGGTTCTGTGTTAGATGCAAACACAAGTTTTCCGACCCCTCTACCG
CATCCACGTGGCCAGGACTTCAATCCATCGTTCATTCATATTTTACTTTCGAGGCCGAGC
GCAACGCAGCGTTGCAACGCGCACGTAAACGACGCGATGTATTAATCGACGCTGAGAAAA
AACTAAACGACCAAGTTAAGGCACTTGTGTCAACTATAATGAATAAAGTTACTAAAAAGT
ACAAAGTCCACGACTCGGTACAAAACGCTACGGATTCTTATCAGAGGTTACTACGTGGGG
TTGAGACGCTTAAACATCTCTCTGAATTCGCTGTGACGAACTGAAGGTGCTTAGGACATC
AAATTTCTGCGAAATGGTCAAAAATCACTGTAAATCGTGTGTAATCACTTCCGTATTGCT
GTTCATGTTGTTCACGCCTTGGTACGTCCGCACAACCCACACGTTTTAAAGCACAATCAT
TACTGTTATAGTAGGGTGGGGTAAATCGAGACATGTTTATTCTCTTTTTACGTCACATGG
TAGTAAACAAAAAATTATTTACAGAATTACGTTACTGTAGCCCCACGACCCTAAATGGTC
GTTGTTAAATGTTCAAAACATGATCAGGAAACAAGGGATTTAGGTATTACCGGTATTCCA
TCTTACCACACAGTACTATATACGTTTGTCGCAGCGACCGCTTAAAAATAATAATTCTTT
CCAATATGATAAAGTATTTATGATTTTTGTCACGACACATTTGGCAAAATAAAAAGTCCC
ATATTTTACAATTGTACAAAACACATGTTAAAACGTTCCCAAACTTTCTATAAATGGGCA
ATTATTCTAACTTTTCCATATATTGTTGACTAGTTTTTCCGCTTACAAGTGAAGTACAAC
AGCACAGTAGTGTACTTCCGCATTTAACTTGGGAAAATTTGCCATTTTAAACCCATAAAC
TCTTGGTCAAGCTATTCTGTTTCACACTTTTGCACTTTTATGTTTTCTGAGCACACGCAT
GCGAAAGAAATATTACAATAGTTTATCTCGTAAAAATGAATTCATTTTAAAAAGTCAAAA
CAATTAAGTTTTTTTGTTCTTTATGAATATAAAGTACACCATAGGCGAAAAAATTGTGAA
TTTTGGGGCTTTTTCTTTATCCAGACTGTGGAAATACTTTATTTTTTTCACGCTCGCAGT
ATTTTCGTTGCTTTTCCTTTTTTATCCGCACACCTTCAAGTTTTCGTTCTTCCAATAAAA
TAATTTCCAATTCAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[516-600] 1.1E-12 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[541-599] 5.32E-12 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[548-596] 9.526 |
| SMART |
Znf_PHD (IPR001965) - T[550-594] 7.8E-10 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[551-593] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[551-595] 1.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PF21A_HUMAN | 28.114 % | 106 | 9.01E-24 |