- Transcript 'KH2012:KH.L142.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.L142.3.v1.A.SL4-1
Possible name(s)
SRP72
Gene model
Location
KhL142 [15,864 / 23,556]
Amino acid sequence
Length: 695
>KH.L142.3.v1.A.SL4-1
QNIVNMANANPTNLVQLYTELNKFINISDYKQALKAANKIIHSKEGKEDVEAMHCKVVCM
MQMNQFSEATKFIDATAEIKDVLVFEKAYCQYRLLHTEEALETISQVKDPDPRLLELKAQ
VLYKLGQYSEALIVYKNLIKECSDDYEEERMTNISAVHAALSSFDGVKTEMGFPIETYEQ
LYNKGCWLLGQDKVEEGRVTLVEAERVCREMFEDDPDVAEDEVDGEVSVIRVQLAYALQL
QGKTDEALTIYNQVIRLRPTDIALVAVASNNIISINREQNVFDSRKKMKATVAPGLDNKL
VPFQKKKINFNRALLFMYSNQWEACRKLLKSLHREHTDTNIPCLIQTAQIGREKGANKAV
EYLKTYISEHSDPDLSPEVDLTDVKLCLVQLLMGSGNLSEACEVLESLGSLSYTPALVSC
LVSLYGAQHEGEGKATKLMQRAIQWHKKNKSPPSIMTSLMWEASEYSLKHNDPKSAASVL
EELLSLDPKNVKVLAKLIFAYSRFNPSKAHQASEDLPSLSDLSVHVDVDDLERNASRITP
RYVKKQKEKDVVEVNVATSLVSEGTSNIEIIKTKKRKKKKNPKPQNFRENYTPDDERWLP
LRERSYYKGRRKDRKKGGVGKGTQGGANTGVADVYDMSHKTSAAVAPNSPKPGSTGSGSH
GNTPINSPKPTHVKGVKGKKSGGGGKKKKKGKGGW
Nucleotide sequence
Length: 2,164
>KH2012:KH.L142.3.v1.A.SL4-1
CAGAATATTGTTAACATGGCGAACGCCAACCCAACCAACTTGGTTCAACTCTACACGGAG
TTAAATAAGTTTATTAATATCTCTGATTATAAGCAAGCGTTGAAAGCTGCGAATAAAATC
ATCCACAGCAAGGAAGGGAAAGAAGATGTTGAAGCCATGCATTGTAAAGTGGTTTGTATG
ATGCAAATGAACCAATTCAGTGAAGCTACTAAGTTCATTGACGCAACTGCCGAGATTAAA
GATGTGCTCGTATTTGAGAAAGCATATTGCCAGTATCGGTTGCTACATACAGAAGAAGCT
TTGGAAACAATCAGTCAAGTGAAAGATCCAGACCCGAGGCTGTTGGAACTTAAAGCACAA
GTTTTGTACAAGCTGGGTCAGTACAGCGAAGCGTTGATTGTTTACAAGAACTTGATCAAG
GAATGTTCGGACGATTATGAAGAGGAACGGATGACGAATATATCGGCCGTGCATGCTGCG
CTGTCCTCGTTTGATGGAGTGAAGACAGAGATGGGCTTCCCGATCGAAACGTACGAACAG
CTTTACAACAAGGGTTGTTGGTTATTGGGGCAAGATAAAGTGGAAGAAGGGAGGGTTACG
TTGGTTGAAGCCGAGAGGGTTTGTCGAGAGATGTTCGAAGATGATCCGGATGTGGCTGAA
GATGAGGTTGATGGCGAGGTGTCTGTTATAAGAGTACAACTCGCATACGCTTTACAACTC
CAGGGAAAAACGGACGAAGCGTTGACGATTTACAACCAAGTGATTCGGTTACGACCAACT
GACATCGCATTGGTTGCTGTTGCATCAAACAATATCATCAGCATTAATAGGGAACAAAAT
GTTTTTGACTCTCGCAAGAAAATGAAAGCAACCGTTGCTCCGGGGCTCGATAACAAGTTG
GTTCCGTTCCAGAAGAAGAAAATCAATTTCAACCGAGCATTGCTGTTCATGTATTCAAAC
CAGTGGGAGGCGTGTCGCAAACTACTAAAGTCTCTCCACCGCGAACACACCGACACCAAC
ATCCCGTGTTTGATTCAAACGGCTCAGATTGGTCGCGAGAAAGGAGCAAATAAAGCTGTG
GAGTATTTAAAGACGTACATCAGCGAACACAGCGACCCTGACCTTTCACCTGAAGTTGAC
CTCACCGATGTAAAGTTGTGTCTTGTACAACTTCTGATGGGGTCGGGAAATTTAAGTGAA
GCATGCGAGGTCCTTGAAAGTTTGGGTTCGTTAAGTTACACGCCAGCATTAGTGTCGTGC
CTGGTTTCATTGTATGGTGCCCAACATGAAGGGGAGGGGAAAGCGACGAAGCTAATGCAA
CGTGCCATACAGTGGCATAAGAAGAATAAGAGCCCGCCATCGATTATGACATCACTGATG
TGGGAGGCATCGGAATATTCGCTCAAGCATAACGATCCGAAATCAGCAGCGAGCGTTCTG
GAGGAACTTCTAAGTTTGGATCCAAAGAACGTGAAGGTTTTGGCGAAACTAATTTTCGCA
TATTCGCGATTCAACCCAAGCAAGGCTCATCAAGCAAGCGAGGATCTCCCATCGTTGTCC
GATCTGTCCGTGCATGTTGACGTTGATGACCTGGAACGAAACGCGTCGCGTATTACACCT
CGGTACGTGAAGAAACAGAAAGAGAAAGATGTTGTGGAGGTTAATGTGGCGACCTCGCTT
GTTTCGGAAGGAACATCAAACATAGAAATAATAAAAACAAAGAAAAGAAAGAAGAAGAAG
AATCCGAAGCCACAGAATTTTCGTGAGAATTACACCCCAGATGACGAGAGATGGTTGCCC
CTTCGTGAAAGATCATACTACAAGGGACGAAGAAAAGATCGCAAGAAAGGAGGGGTTGGT
AAAGGAACACAAGGTGGCGCCAACACGGGGGTCGCGGATGTTTACGATATGTCGCACAAG
ACTTCAGCAGCCGTTGCCCCAAACTCACCCAAACCTGGGTCCACTGGGTCGGGTAGTCAC
GGCAACACCCCTATAAATTCCCCCAAGCCCACCCACGTTAAAGGGGTGAAGGGCAAGAAA
TCCGGGGGCGGGGGTAAGAAGAAGAAGAAGGGTAAAGGGGGCTGGTAGTTCCCCCTGAGC
GGAAATCATATTTGACGTTTTATTTGCAATGGAAATAAGGAATAAATATTTGCGGAGATT
CGGA
| PIRSF |
SRP72 (IPR026270) - T[5-695] 7.1E-185 |
| PANTHER |
SRP72 (IPR026270) - T[6-692] 1.3E-207 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[11-148] 1.66E-18 - T[202-262] 1.66E-18 - T[359-505] 4.72E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[13-170] 1.1E-50 - T[172-289] 1.0E-6 - T[297-515] 1.5E-7 |
| Pfam |
SRP_TPR-like (IPR031545) - T[39-159] 1.3E-19 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[112-145] 7.004 - T[228-261] 9.597 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[112-145] 6.048 - T[228-261] 8.703 - T[457-490] 6.608 |
| SMART |
TPR_repeat (IPR019734) - T[112-145] 1.9 - T[228-261] 0.0056 |
| Pfam |
TPR_repeat (IPR019734) - T[233-260] 0.0054 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[562-609] 7.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 41.616 % | 458 | 7.54E-153 |
