- Transcript 'KH2012:KH.L142.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.L142.3.v1.A.nonSL5-1
Possible name(s)
SRP72
Gene model
Location
KhL142 [15,866 / 23,556]
Amino acid sequence
Length: 694
>KH.L142.3.v1.A.nonSL5-1
NIVNMANANPTNLVQLYTELNKFINISDYKQALKAANKIIHSKEGKEDVEAMHCKVVCMM
QMNQFSEATKFIDATAEIKDVLVFEKAYCQYRLLHTEEALETISQVKDPDPRLLELKAQV
LYKLGQYSEALIVYKNLIKECSDDYEEERMTNISAVHAALSSFDGVKTEMGFPIETYEQL
YNKGCWLLGQDKVEEGRVTLVEAERVCREMFEDDPDVAEDEVDGEVSVIRVQLAYALQLQ
GKTDEALTIYNQVIRLRPTDIALVAVASNNIISINREQNVFDSRKKMKATVAPGLDNKLV
PFQKKKINFNRALLFMYSNQWEACRKLLKSLHREHTDTNIPCLIQTAQIGREKGANKAVE
YLKTYISEHSDPDLSPEVDLTDVKLCLVQLLMGSGNLSEACEVLESLGSLSYTPALVSCL
VSLYGAQHEGEGKATKLMQRAIQWHKKNKSPPSIMTSLMWEASEYSLKHNDPKSAASVLE
ELLSLDPKNVKVLAKLIFAYSRFNPSKAHQASEDLPSLSDLSVHVDVDDLERNASRITPR
YVKKQKEKDVVEVNVATSLVSEGTSNIEIIKTKKRKKKKNPKPQNFRENYTPDDERWLPL
RERSYYKGRRKDRKKGGVGKGTQGGANTGVADVYDMSHKTSAAVAPNSPKPGSTGSGSHG
NTPINSPKPTHVKGVKGKKSGGGGKKKKKGKGGW
Nucleotide sequence
Length: 2,162
>KH2012:KH.L142.3.v1.A.nonSL5-1
GAATATTGTTAACATGGCGAACGCCAACCCAACCAACTTGGTTCAACTCTACACGGAGTT
AAATAAGTTTATTAATATCTCTGATTATAAGCAAGCGTTGAAAGCTGCGAATAAAATCAT
CCACAGCAAGGAAGGGAAAGAAGATGTTGAAGCCATGCATTGTAAAGTGGTTTGTATGAT
GCAAATGAACCAATTCAGTGAAGCTACTAAGTTCATTGACGCAACTGCCGAGATTAAAGA
TGTGCTCGTATTTGAGAAAGCATATTGCCAGTATCGGTTGCTACATACAGAAGAAGCTTT
GGAAACAATCAGTCAAGTGAAAGATCCAGACCCGAGGCTGTTGGAACTTAAAGCACAAGT
TTTGTACAAGCTGGGTCAGTACAGCGAAGCGTTGATTGTTTACAAGAACTTGATCAAGGA
ATGTTCGGACGATTATGAAGAGGAACGGATGACGAATATATCGGCCGTGCATGCTGCGCT
GTCCTCGTTTGATGGAGTGAAGACAGAGATGGGCTTCCCGATCGAAACGTACGAACAGCT
TTACAACAAGGGTTGTTGGTTATTGGGGCAAGATAAAGTGGAAGAAGGGAGGGTTACGTT
GGTTGAAGCCGAGAGGGTTTGTCGAGAGATGTTCGAAGATGATCCGGATGTGGCTGAAGA
TGAGGTTGATGGCGAGGTGTCTGTTATAAGAGTACAACTCGCATACGCTTTACAACTCCA
GGGAAAAACGGACGAAGCGTTGACGATTTACAACCAAGTGATTCGGTTACGACCAACTGA
CATCGCATTGGTTGCTGTTGCATCAAACAATATCATCAGCATTAATAGGGAACAAAATGT
TTTTGACTCTCGCAAGAAAATGAAAGCAACCGTTGCTCCGGGGCTCGATAACAAGTTGGT
TCCGTTCCAGAAGAAGAAAATCAATTTCAACCGAGCATTGCTGTTCATGTATTCAAACCA
GTGGGAGGCGTGTCGCAAACTACTAAAGTCTCTCCACCGCGAACACACCGACACCAACAT
CCCGTGTTTGATTCAAACGGCTCAGATTGGTCGCGAGAAAGGAGCAAATAAAGCTGTGGA
GTATTTAAAGACGTACATCAGCGAACACAGCGACCCTGACCTTTCACCTGAAGTTGACCT
CACCGATGTAAAGTTGTGTCTTGTACAACTTCTGATGGGGTCGGGAAATTTAAGTGAAGC
ATGCGAGGTCCTTGAAAGTTTGGGTTCGTTAAGTTACACGCCAGCATTAGTGTCGTGCCT
GGTTTCATTGTATGGTGCCCAACATGAAGGGGAGGGGAAAGCGACGAAGCTAATGCAACG
TGCCATACAGTGGCATAAGAAGAATAAGAGCCCGCCATCGATTATGACATCACTGATGTG
GGAGGCATCGGAATATTCGCTCAAGCATAACGATCCGAAATCAGCAGCGAGCGTTCTGGA
GGAACTTCTAAGTTTGGATCCAAAGAACGTGAAGGTTTTGGCGAAACTAATTTTCGCATA
TTCGCGATTCAACCCAAGCAAGGCTCATCAAGCAAGCGAGGATCTCCCATCGTTGTCCGA
TCTGTCCGTGCATGTTGACGTTGATGACCTGGAACGAAACGCGTCGCGTATTACACCTCG
GTACGTGAAGAAACAGAAAGAGAAAGATGTTGTGGAGGTTAATGTGGCGACCTCGCTTGT
TTCGGAAGGAACATCAAACATAGAAATAATAAAAACAAAGAAAAGAAAGAAGAAGAAGAA
TCCGAAGCCACAGAATTTTCGTGAGAATTACACCCCAGATGACGAGAGATGGTTGCCCCT
TCGTGAAAGATCATACTACAAGGGACGAAGAAAAGATCGCAAGAAAGGAGGGGTTGGTAA
AGGAACACAAGGTGGCGCCAACACGGGGGTCGCGGATGTTTACGATATGTCGCACAAGAC
TTCAGCAGCCGTTGCCCCAAACTCACCCAAACCTGGGTCCACTGGGTCGGGTAGTCACGG
CAACACCCCTATAAATTCCCCCAAGCCCACCCACGTTAAAGGGGTGAAGGGCAAGAAATC
CGGGGGCGGGGGTAAGAAGAAGAAGAAGGGTAAAGGGGGCTGGTAGTTCCCCCTGAGCGG
AAATCATATTTGACGTTTTATTTGCAATGGAAATAAGGAATAAATATTTGCGGAGATTCG
GA
| PIRSF |
SRP72 (IPR026270) - T[4-694] 7.1E-185 |
| PANTHER |
SRP72 (IPR026270) - T[5-691] 1.3E-207 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[10-147] 1.76E-18 - T[201-261] 1.76E-18 - T[359-504] 4.51E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[12-169] 1.1E-50 - T[171-288] 1.0E-6 - T[296-514] 1.5E-7 |
| Pfam |
SRP_TPR-like (IPR031545) - T[38-158] 1.2E-19 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[111-144] 7.004 - T[227-260] 9.597 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[111-144] 6.048 - T[227-260] 8.703 - T[456-489] 6.608 |
| SMART |
TPR_repeat (IPR019734) - T[111-144] 1.9 - T[227-260] 0.0056 |
| Pfam |
TPR_repeat (IPR019734) - T[232-259] 0.0054 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[561-608] 7.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 41.921 % | 458 | 5.7E-153 |
