- Transcript 'Mooccu.CG.ELv1_2.S24...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- EST 'AHC0AAA256YG05_RM1' >
- Clone 'cieg029a04' >
- Transcript 'KH2012:KH.L139.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.L139.3.v1.A.ND1-1
Possible name(s)
LHCGR; RXFP2; TSHR
Gene model
Location
KhL139 [178,898 / 182,330]
Amino acid sequence
Length: 766
>KH.L139.3.v1.A.ND1-1
KIYRSVRINNLNMRFLWMLLLFLVESNASELEREDFSFLTRTRRKQVPAQCGVTSFDEKN
CTCPSWAYECGCRGEGRGCDVGNTTCVPHHQLCDGVKQCPYGSDEVGCSCATTQVRCGCV
FGKSGCRNDTICIDKIGLISGVSKCSDGSDNPCEIGFQRMHVHCQLKYFQCEDEIMTHRI
LMYRSSRDIGKCWPIQTHQSSNKTVEKWRCIKDMSLSHGREVCHSIINKTESLISCAFNN
RLYMGSYLCSPFANQCVFGKYIVPKKSYKYGFKCTARSSYACGGGAIYIPQSNLEDSDVN
CADKSDLCFVDGKMKCFRCLDGQLLISPKQICDGIFDCFDLSDECLCGDQQACSSVMASK
RNCTEGQVFTNNSGCVNPQVIFEKNSNFSLSIEASRRFVKMRIYEEVEEYKCHKFNAMSG
TKCDGYLDCPYGDDECGCESELGSCKHVKKCFFGNYKYRVCDGVVSAIVHYKSQIEKLRR
AQRGGDTRFDNFIGLCTEGFDEANCTNRHLCIEGASISISSSRVCDGVVDCDDGSDEIES
LCRGSRFYCLNKDPISVPRTTVEDGIKDCSDGSDECPVNTTKSTIFSSQFEMIANPILSA
IFWGMGVVSIFGNCLVIVTTIKRQVKAKTPSSTARINAWFITNLAMSDLLMGVYLLSISI
QGAIFSGRYCYHDMEWRSGTLCSLMGATAVLATEASVFMMTIMTTHRLVSVMRPFALRNV
ELQPFAIITTYRLGVGLCSCFHAIDKVAFRIFRSFCMVSEPVLQNG
Nucleotide sequence
Length: 2,848
>KH2012:KH.L139.3.v1.A.ND1-1
AAGATATATAGAAGTGTCCGCATAAACAACTTGAATATGAGGTTTCTATGGATGCTGTTG
TTGTTCTTGGTGGAATCAAACGCAAGTGAATTGGAAAGAGAGGATTTCTCGTTTCTTACA
AGAACAAGACGCAAACAGGTTCCCGCCCAATGTGGGGTGACGTCATTCGATGAAAAAAAC
TGCACCTGTCCAAGTTGGGCTTATGAGTGCGGGTGTAGGGGGGAGGGTAGGGGTTGCGAT
GTTGGAAACACCACATGCGTGCCACACCACCAACTATGCGATGGTGTCAAGCAATGTCCA
TACGGAAGTGACGAAGTCGGTTGTTCTTGCGCAACTACTCAAGTTAGATGTGGCTGCGTG
TTTGGTAAGAGCGGATGTCGCAATGATACAATTTGCATCGATAAGATCGGTTTAATCAGC
GGAGTGTCGAAGTGTAGCGATGGAAGCGACAACCCGTGCGAGATTGGCTTCCAACGAATG
CATGTTCACTGCCAGTTGAAGTATTTTCAATGCGAGGATGAAATTATGACGCACAGGATC
TTGATGTATAGGAGTAGTAGAGATATTGGGAAATGTTGGCCGATTCAAACTCATCAAAGC
AGCAACAAGACGGTAGAGAAATGGCGGTGTATCAAGGACATGAGTCTTTCACACGGTCGG
GAGGTTTGCCATTCGATTATTAATAAGACAGAGTCCTTGATTTCATGCGCCTTCAACAAC
AGGCTTTACATGGGTTCCTATTTATGCAGTCCCTTCGCAAACCAGTGTGTGTTTGGTAAA
TACATTGTGCCTAAGAAAAGTTACAAGTACGGCTTTAAGTGCACGGCAAGATCCTCGTAC
GCCTGCGGGGGAGGGGCTATCTATATCCCGCAGTCAAACCTAGAAGACTCCGATGTCAAC
TGCGCAGATAAGTCGGATCTTTGTTTCGTAGATGGAAAGATGAAATGTTTCAGATGTTTA
GACGGCCAGCTGCTAATCTCGCCAAAGCAAATTTGCGACGGGATTTTCGACTGCTTTGAT
TTATCGGACGAATGTTTGTGTGGCGACCAGCAGGCTTGCAGCAGCGTCATGGCCAGTAAA
AGAAACTGCACGGAAGGTCAGGTTTTTACCAATAACAGCGGCTGCGTAAATCCCCAAGTA
ATCTTTGAAAAAAACAGCAACTTTTCACTAAGCATCGAAGCTAGTCGTCGTTTCGTGAAA
ATGAGAATTTATGAAGAAGTAGAGGAATATAAATGTCATAAGTTTAATGCGATGAGCGGA
ACGAAATGTGACGGCTACTTGGACTGCCCGTACGGGGATGACGAATGCGGTTGCGAGAGT
GAGCTTGGTTCATGCAAACACGTAAAGAAATGTTTCTTCGGGAATTATAAGTACAGAGTA
TGTGACGGCGTGGTGTCCGCTATAGTTCATTATAAATCACAGATCGAAAAACTTCGCCGG
GCACAACGGGGAGGGGATACGAGGTTCGACAACTTTATTGGGCTTTGTACCGAAGGTTTC
GACGAAGCTAACTGCACGAACCGCCATCTTTGTATCGAAGGAGCTTCTATCAGTATATCG
TCATCGCGTGTGTGCGATGGTGTTGTTGATTGTGACGATGGTTCTGATGAAATAGAATCG
CTATGTCGCGGTTCGAGGTTTTATTGTTTAAACAAGGACCCAATATCGGTACCGAGAACG
ACGGTTGAAGATGGGATCAAAGACTGTTCAGATGGAAGCGACGAATGTCCTGTTAACACG
ACGAAATCCACAATATTTTCCTCTCAGTTTGAAATGATCGCCAACCCGATACTCAGCGCT
ATATTTTGGGGCATGGGAGTTGTGTCTATATTTGGCAACTGTCTCGTTATAGTGACAACT
ATCAAGCGTCAGGTTAAAGCGAAAACTCCAAGTTCAACAGCCCGAATAAACGCCTGGTTT
ATTACAAACCTCGCTATGTCAGATTTACTGATGGGCGTTTACCTTCTCAGTATTTCAATA
CAGGGCGCCATTTTCTCTGGAAGATATTGCTACCATGACATGGAATGGAGAAGCGGGACA
TTGTGTAGCTTGATGGGAGCGACTGCGGTTCTTGCAACCGAAGCATCAGTGTTTATGATG
ACGATAATGACAACACATCGACTCGTGAGCGTCATGCGACCTTTCGCATTGAGGAATGTT
GAACTGCAACCATTCGCAATTATAACTACATATAGGTTGGGCGTTGGCTTGTGTTCTTGC
TTTCACGCCATTGATAAAGTTGCCTTCCGGATATTTCGTTCTTTCTGTATGGTATCGGAA
CCGGTTCTACAAAACGGATGAAGTATCGAAAGATTTGATCTTTAAATTAGTCGACCGTGT
GGGCAACAACACTGCGAATAATTGGTTGTCGGCTGTTGAAAAATTGCGAGCAACATTTGA
GCTTTATGAAGTGAAGGGAGAGATCGGTTATTACGGGGAGACAAGCGTCTGCATGCCTCG
TCTATTCGTAAATAAAGGGGAGGCGACTTGGGAATACTCGACCTCCATTATCATCATGAA
CTTCGTCTTGTTTATTTATATCATGGTCAGTTATATCGTGATATATAGGAAAGGGACAGC
CATGGGGACGGAGAAGAGAGCGGCCGCCAATAAAAAGCTTCAAGCCCGAATCATGCGGCT
CGTCTTCACCGATTTTTGCTGTTGGATGCCAATATGTGTGATGGCGTTTGTAAGCCTCTC
TGGGATTCGTATTGATAAAGTTGTGTACGCTGTAACCGCTGGCTTTCTTCTCCCAATTAA
CAGCGCGGTTAACCCACTAATTTACACAAATGTTGTTGTTAAAGCATTTCGTAAACTTGC
AGCCAAGATATCATCATTGAAGCGCTGG
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[62-110] 0.0068 - T[273-310] 0.53 - T[312-349] 0.064 - T[495-540] 0.038 - T[541-578] 0.077 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[62-109] 9.95 - T[495-543] 10.338 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[72-110] 2.62E-5 - T[316-347] 6.68E-5 - T[507-538] 2.09E-5 - T[541-580] 5.89E-6 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[82-108] 5.81195E-5 - T[519-537] 0.00125246 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[84-105] 2.5E-18 - T[130-151] 2.5E-18 - T[323-344] 2.5E-18 - T[516-537] 2.5E-18 - T[554-575] 2.5E-18 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[91-188] 3.2E-53 - T[330-729] 3.2E-53 |
| Pfam |
PRKCSH_N (IPR028146) - T[507-578] 1.3E-9 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[612-715] 13.691 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[612-729] 8.9E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|