- Transcript 'KH2012:KH.L132.17.v1...'
Transcript Model
Transcript Id
KH2012:KH.L132.17.v1.A.SL1-1
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
KhL132 [98,494 / 102,880]
Amino acid sequence
Length: 445
>KH.L132.17.v1.A.SL1-1
LWLICQLFKTMDIQPQTSKESDKHDPLFGYNAPFTVNNGFQPPQLRNPHTGVFPPNPQAP
PHYIGYRGGGESPGLETKRPPSLVGSKIHPEYQYGGISQHQELGSRFTGFRASPPTSNDT
KYYNGGSPATNFPGIDTEPQLTPLKSNIEKMTSEKDNNGKHDVISNIDREAAFYNEEGRG
SGGVTLPPFPGLPQIKTSTPPADEWTGRENRSDDYSTAAYSGNDVTKTSSTFVEDSPSHV
TTKEETEDAGEEADPTKHWLTASGRKKRVPYTKYQLLELEKEFHYNQYLSRERRLEVAKS
VKLTDRQVKIWFQNRRMKWKKERREERQRDDHHPMSGIHHQGMTHPGVPHPGMHAYSSTA
AALAAAGIGHLNHHPFNNQPPMVPDISQHYGYPATSALPAPARHHGATVNQMVAAADFFT
NWHHPYQVPTRDPTNPTLPLGCMYN
Nucleotide sequence
Length: 1,532
>KH2012:KH.L132.17.v1.A.SL1-1
ACTTTGGTTAATTTGCCAATTATTTAAAACAATGGATATTCAACCTCAAACTTCGAAGGA
AAGCGACAAACACGATCCATTGTTCGGTTACAATGCTCCATTCACCGTCAACAATGGGTT
CCAACCCCCTCAATTAAGGAACCCACACACCGGGGTGTTTCCCCCTAACCCCCAAGCCCC
ACCCCACTATATTGGGTACAGGGGTGGCGGGGAATCACCTGGGTTGGAAACAAAACGACC
CCCTTCTCTGGTTGGTTCAAAAATTCACCCCGAGTATCAATACGGGGGAATTTCCCAACA
CCAGGAACTGGGGTCACGGTTCACTGGTTTCAGGGCATCCCCCCCAACCAGCAACGACAC
CAAGTATTACAACGGGGGATCCCCTGCTACAAACTTCCCCGGAATCGATACTGAACCCCA
ATTGACCCCTTTGAAATCGAACATTGAGAAAATGACGTCAGAGAAAGATAACAATGGCAA
ACATGACGTCATATCCAACATCGATCGCGAAGCGGCGTTTTACAACGAGGAGGGGAGGGG
TAGCGGGGGGGTCACATTACCCCCATTCCCGGGATTACCCCAAATCAAAACCTCTACCCC
ACCCGCGGATGAATGGACGGGGAGGGAAAATAGATCCGATGATTATTCAACCGCGGCATA
TAGCGGAAACGACGTCACGAAGACGTCATCGACGTTTGTTGAGGATTCACCAAGTCACGT
GACCACTAAGGAAGAAACGGAAGACGCGGGGGAAGAAGCTGACCCAACGAAACATTGGCT
AACCGCTAGTGGGCGCAAGAAACGAGTGCCGTACACAAAATATCAACTTCTGGAACTTGA
GAAAGAATTTCATTACAATCAATATTTATCGCGGGAGAGAAGACTAGAGGTTGCAAAGTC
AGTGAAACTTACCGACCGTCAAGTGAAGATTTGGTTTCAAAACCGAAGAATGAAATGGAA
GAAAGAAAGAAGGGAGGAGAGACAACGGGACGATCACCATCCAATGTCGGGGATCCACCA
TCAGGGAATGACCCACCCGGGAGTTCCCCACCCTGGTATGCATGCATACTCCAGCACAGC
AGCAGCGTTAGCAGCGGCGGGTATCGGGCATTTAAACCATCACCCTTTCAACAACCAACC
ACCAATGGTGCCTGACATAAGCCAACATTACGGCTACCCTGCAACGTCAGCTTTACCGGC
TCCAGCGCGCCACCACGGGGCCACAGTTAACCAGATGGTGGCAGCAGCGGATTTTTTCAC
AAACTGGCATCATCCTTACCAAGTGCCGACCCGTGATCCAACCAACCCAACGTTACCTCT
GGGTTGTATGTACAACTGACGTCGTAATTGTTAATATAAGTTATTGTGATGTCATACAAC
GCATCGATGAGCAAGTTACGTCATCAAGAATCTTTTATGACAAAACATAGAATCGTTTCG
TATTGTGTGACGTGTGAATGCTGCATTGTGTGGCTATTATGATGTAATGATTTTGTTTTT
CGCATTTTCAATAAAACTTTGTTGAAACCTCG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[258-324] 8.55E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[262-322] 21.556 |
| SMART |
Homeobox_dom (IPR001356) - T[264-326] 1.1E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[265-323] 9.50185E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[265-321] 2.1E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[286-297] 2.4E-7 - T[301-311] 2.4E-7 - T[311-320] 2.4E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[297-320] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 64.646 % | 124 | 3.74E-32 |
| HXC10_HUMAN | 47.552 % | 120 | 1.41E-30 |
| HXA10_HUMAN | 53.913 % | 119 | 1.19E-29 |
