- EST 'BW121452' >
- Transcript 'KH2012:KH.L128.12.v1...'
Transcript Model
Transcript Id
KH2012:KH.L128.12.v1.A.SL1-1
Possible name(s)
HOXA3; HOXB3; MNX1
Gene model
Location
KhL128 [176,548 / 180,077]
Amino acid sequence
Length: 414
>KH.L128.12.v1.A.SL1-1
YLRFKMMLSTSKSALVDVLRERLRHANDVGSQQSYVPLEERTSDSDGDRKSDSTPPPFLA
ASPTSSFGLSSPGRRASDPRKRSPETPIHQKSDSTENVPKRAKFSIDSLLASDSKPPTER
SRNAHELYFNEWNRTERGTPNYQYSPSKQTPRFLSNFHPSQQTEIKNETSAETNTSDTQP
PVLPRSHIYPYFPINPFQNGMTSMQNLNSPSQTAPLAPSSPSSLSPISSTSSSPKPSIGG
TPLLEEPRSPTSSNLQDFRHDAPSLGIYPGAFPHPMQMHQGFPHTMGARLPSLPFAAPFG
GQPFRPPFNINSFPLSWLRNDAVLRSLTEFAAHPGLMNRSRRPRTAFTSQQLLELERQFK
LNKYLSRPKRFEVATTLQLTETQVKIWFQNRRMKWKRSKKSRSSGSSSSPTKEQ
Nucleotide sequence
Length: 1,560
>KH2012:KH.L128.12.v1.A.SL1-1
CTTCTATCGCATTGAACCTTTGATATTTAAGATTTAAAATGATGCTAAGTACTTCAAAGT
CAGCTCTGGTCGATGTATTACGTGAGCGGTTACGTCACGCAAATGACGTAGGTAGTCAAC
AGAGTTACGTTCCACTGGAAGAGCGAACCTCAGATTCAGATGGCGACCGGAAATCTGACT
CCACTCCTCCGCCTTTCCTTGCTGCCTCTCCGACATCGTCTTTCGGACTCAGCTCCCCGG
GAAGACGAGCATCGGATCCCCGCAAACGAAGCCCCGAAACCCCGATCCACCAGAAATCAG
ACTCAACAGAAAACGTCCCGAAACGAGCCAAGTTTTCAATCGATTCACTTCTGGCGTCTG
ACTCCAAACCTCCAACCGAGCGATCCAGAAATGCTCATGAACTCTACTTCAACGAATGGA
ATCGTACAGAAAGAGGAACCCCCAACTACCAATACAGCCCTTCCAAACAAACCCCAAGAT
TCCTCTCAAACTTCCACCCATCCCAACAAACCGAAATAAAAAATGAAACCTCTGCTGAAA
CCAACACAAGCGACACTCAACCCCCAGTGTTGCCGCGCAGCCATATTTATCCCTACTTTC
CTATCAACCCATTCCAAAACGGCATGACTAGCATGCAGAACTTGAATTCTCCATCTCAGA
CCGCTCCTCTTGCTCCCTCCTCCCCCTCCTCCCTCTCTCCAATCTCATCCACGTCATCCT
CCCCAAAACCCTCCATTGGGGGAACTCCGCTCCTGGAAGAACCAAGATCACCCACATCTT
CCAACCTTCAAGACTTCAGACACGACGCCCCATCACTTGGTATCTACCCCGGGGCTTTCC
CTCACCCCATGCAAATGCATCAGGGTTTTCCTCATACGATGGGGGCTCGTTTACCCAGCT
TGCCTTTCGCGGCTCCGTTCGGTGGCCAACCCTTCCGTCCTCCATTCAACATCAACTCCT
TCCCACTCTCATGGCTGAGGAACGACGCGGTCCTCAGGAGCTTGACAGAATTCGCCGCCC
ACCCTGGTTTAATGAACCGATCCCGACGTCCTCGTACAGCTTTCACCTCCCAGCAACTGC
TTGAACTTGAACGACAATTCAAACTGAACAAGTATTTGTCACGACCAAAGAGATTTGAAG
TTGCCACCACGCTTCAATTAACCGAGACCCAGGTCAAAATCTGGTTTCAAAACCGCAGAA
TGAAATGGAAGCGAAGCAAGAAATCCAGAAGCTCAGGTTCATCGTCGAGCCCGACTAAGG
AGCAGTAACATTAACATTTCTTTTACTCTTGTGAAGTTCAAAATATCCGAAAATTTCCGA
AGTTTCCCGAAGAAGGAAATAGGCAGCTTTTGTGACATGAACAGTATCATTTGGTGTTTC
AAACTTTCTTTAGAATGTTATAAGTCTGCTATATGGTTGTATTTCACTGTGTTCAGTGTA
CACAGGAACTTGTCTTTTTTTCTGACGCTACTTTTCTCATTCTGGTTTTTCTCTCGATAA
TTATTTATTGCAGTAATATATCGTTGTAATTATTTACAATAAACGCAAAAAGAAAAAAAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[331-400] 1.15E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[338-398] 22.172 |
| SMART |
Homeobox_dom (IPR001356) - T[340-402] 1.9E-25 |
| CDD |
Homeobox_dom (IPR001356) - T[341-395] 2.87691E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[341-397] 1.6E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[362-373] 4.5E-8 - T[377-387] 4.5E-8 - T[387-396] 4.5E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[373-396] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA3_HUMAN | 57.143 % | 94.7 | 3.31E-21 |
| HXB3_HUMAN | 57.143 % | 95.9 | 1.45E-21 |
| MNX1_HUMAN | 67.368 % | 129 | 1.03E-33 |
