- Transcript 'KH2012:KH.L123.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.L123.1.v1.A.ND4-1
Possible name(s)
RPL8
Gene model
Location
KhL123 [66,798 / 71,467]
Amino acid sequence
Length: 275
>KH.L123.1.v1.A.ND4-1
CLALFAITRPFSCFRFEVRMGRVIRSQRKGPGSIFKAHTTHRKGAAKLRSVDFAERHGYI
KGIIKDIVHDPGRGAPLVKVQFQDPYKYRRRLETFVAVEGNFTGQSIYCGKKAQLTIGNV
LPVGILPEGTVVCGLEEKTGDRGKLAKTSGNYATIIAHNPDTNRTRVKLPSGAKKLIPST
NRAIIGVVAGGGRIDKPLLKAGAAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGS
PSTVRRDASPGRKVGLIAARRTGRLRGSRVSKDKE
Nucleotide sequence
Length: 977
>KH2012:KH.L123.1.v1.A.ND4-1
ATGACCTATAACGTGGTTAATGCTTGGCGCTGTTCGCAATCACCCGTCCTTTTTCGTGTT
TCAGGTTTGAAGTCAGAATGGGTCGAGTTATCAGGTCCCAGCGAAAGGGTCCTGGATCCA
TCTTCAAAGCTCATACTACTCACCGCAAGGGAGCAGCTAAACTGCGTTCTGTTGATTTTG
CAGAAAGGCATGGATACATTAAAGGTATAATCAAGGATATTGTCCATGATCCCGGTCGTG
GCGCACCTTTGGTGAAAGTTCAATTCCAGGATCCATACAAATACAGACGCAGGTTGGAAA
CATTTGTGGCTGTTGAGGGAAACTTTACTGGTCAATCCATCTACTGTGGCAAAAAAGCAC
AGCTCACCATTGGAAATGTTCTGCCTGTTGGAATTCTTCCAGAAGGAACAGTTGTTTGTG
GTTTGGAAGAAAAAACTGGTGATCGTGGCAAACTCGCAAAAACCTCTGGAAATTATGCAA
CCATCATTGCCCACAATCCAGACACAAACAGAACAAGAGTGAAGTTGCCATCTGGTGCAA
AGAAACTGATTCCATCAACCAACCGGGCAATCATAGGAGTTGTTGCTGGTGGAGGTCGTA
TTGACAAACCACTTTTGAAAGCAGGAGCTGCCTATCACAAATATAAAGCAAAGCGTAACT
GCTGGCCAAGAGTGCGTGGTGTAGCCATGAACCCTGTTGAGCATCCATTTGGTGGTGGTA
ACCATCAACATATTGGTTCACCATCCACAGTTCGCCGTGATGCTTCTCCTGGTAGAAAAG
TCGGTCTTATTGCTGCAAGAAGAACCGGTCGATTGCGAGGATCCAGAGTGTCAAAAGACA
AAGAATAATCAATTTTTGTCGCTTGATAATAAAACAATACAAGAGATGGATTTACGTATT
TAAGCACTAAGGCCCAGTATATATCGTTTTCTAATTACCTGTTTATCCAAGACATTTAGT
TAATAGGCATATCAATG
| PIRSF |
Ribosomal_L2 (IPR002171) - T[12-275] 4.7E-65 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[18-116] 6.85E-20 |
| PANTHER |
Ribosomal_L2 (IPR002171) - T[20-274] 3.0E-136 |
| SMART |
Ribosomal_L2 (IPR002171) - T[30-109] 5.7E-28 |
| Pfam |
Rbsml_prot_L2_RNA-bd_dom (IPR022666) - T[33-108] 2.7E-11 |
| Gene3D |
Rib_L2_dom2 (IPR014722) - T[109-188] 1.7E-34 |
| SMART |
Ribosomal_L2_C (IPR022669) - T[115-250] 2.7E-65 |
| Pfam |
Ribosomal_L2_C (IPR022669) - T[117-243] 1.7E-43 |
| SUPERFAMILY |
Translation_prot_SH3-like_sf (IPR008991) - T[118-265] 1.5E-51 |
| Gene3D |
Ribosomal_L2_dom3 (IPR014726) - T[189-267] 5.8E-44 |
| ProSitePatterns |
Ribosomal_L2_CS (IPR022671) - T[216-227] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL8_HUMAN | 78.125 % | 405 | 9.32E-145 |
