- Transcript 'KH2012:KH.L171.11.v1...' >
- Transcript 'KH2012:KH.L122.5.v2....'
Transcript Model
Transcript Id
KH2012:KH.L122.5.v2.A.SL3-1
Possible name(s)
PARN; PNLDC1
Gene model
Location
KhL122 [28,982 / 33,117]
Amino acid sequence
Length: 344
>KH.L122.5.v2.A.SL3-1
SKAIDESSFICIDGEFTGLTNHRYNLTSYDSPEERYLKLHSNTENFMLLQFGMCTFSWKE
DEQKYQVDAFNFYIFPFRSSFPGVPDRIFSCQASSLDFLTLQDFDFNKAIKEGIPFLRPS
EEASVRSAIEEKQAYRQSTYKSPAKFDGVGRSPSSKGPSTPITDQKTKDFTEKVVAKIKN
FLENTEDSEIVLEPCNSYLRKILFENIPAAFPGKILVESRTDEQTHQRHIVVVRGASASL
QKERNLQAKVKEESNLEEAVGFSKIVKKLSQSQKLIVGHNMLLDVFYTIQQFVCPLPDVL
EEFKSLVGCVFPKLLDTKLMGSMLPFRVSWCSTYGVVLILLQIS
Nucleotide sequence
Length: 2,350
>KH2012:KH.L122.5.v2.A.SL3-1
TCAGCAAAGCGATTGACGAATCAAGTTTTATCTGCATTGATGGGGAATTCACCGGTTTAA
CGAACCATCGGTATAATTTAACGTCCTATGATTCGCCAGAGGAACGTTATTTGAAATTGC
ATTCAAACACAGAAAATTTTATGCTGCTGCAGTTTGGAATGTGCACTTTTTCATGGAAGG
AAGACGAACAAAAATATCAAGTTGATGCGTTTAACTTTTACATCTTCCCGTTCCGTTCCT
CGTTTCCTGGAGTTCCTGATCGGATATTTTCATGCCAAGCTTCAAGTCTTGATTTCTTGA
CTTTACAAGACTTTGATTTCAACAAAGCAATAAAAGAAGGGATCCCATTTCTTCGACCAA
GTGAAGAAGCTTCTGTTAGATCTGCGATTGAAGAAAAACAAGCTTATCGTCAATCTACTT
ACAAATCACCAGCCAAGTTTGACGGCGTTGGTCGTAGCCCTTCATCCAAAGGGCCTTCCA
CACCAATCACCGACCAGAAAACGAAAGATTTCACAGAAAAAGTTGTCGCAAAAATTAAAA
ACTTTTTGGAAAACACAGAAGATTCGGAAATTGTGTTGGAACCATGTAACAGTTATCTAA
GAAAAATATTATTTGAGAACATTCCTGCTGCATTTCCCGGTAAAATCCTGGTCGAGTCGC
GCACTGACGAACAGACTCATCAGCGCCACATAGTGGTGGTACGTGGTGCGAGCGCCTCGT
TACAAAAGGAACGAAACTTACAAGCCAAAGTTAAAGAGGAAAGCAACCTGGAAGAGGCTG
TGGGATTCTCGAAGATTGTTAAGAAACTGAGTCAAAGTCAAAAACTGATAGTTGGCCATA
ATATGTTGCTTGATGTCTTTTACACGATACAACAGTTTGTTTGCCCATTACCCGACGTGC
TTGAAGAGTTCAAGTCACTTGTGGGATGTGTGTTTCCTAAACTTCTTGACACAAAACTGA
TGGGGAGCATGCTGCCTTTTAGGGTGAGTTGGTGTTCAACATATGGCGTGGTGTTAATTT
TATTGCAAATTTCATAAAAAAAAAAATTATACAAAAATGTATTTTTTTTGTAATTTTTTG
ATTAAAGACTATAGGAAATTTTCACTGCTAACTAGTGGCAGTATTATAATGAAAATGTAC
ATCAACCCTTTCCTTATATATCCCGACTATGGGCATAAACATTTGTAGTCAATTCAACCA
AAGCAATCTTGACCAGGACCTACTATCAACCACAGCACTGGGTGATATGAACGCGCGTTT
ACGTGAACCCCCCTTCCAACCGCCGGACATCACGGTACCCGGTAAATATAACGTGGGGTC
AACTAAAAGTCAGGATTCAAACTTACATGAAGCAGCATATGATGCCTATGTAACAGGTTC
AGCTTTTCTATCAATGGTAAATTACTTGAAGTCGTTTCAAACAAATAAAAAGATTCTCAC
TTCGTTTTCATCTCTTTGTTCATTGATTTCACCTTATGTTAACAAAGTATTTTTGATGCG
AAGTTTTGACATCCCATATTTGAACTTAAGTGGTCCCGATTTATCCCCATGTCGGGACCA
TGTGTTTCACCTTGAGTTCCCTGCGCTGTGGAAATCTAACGACCTGCGCCAACTTTTCTC
ACCTGTTGGCCAAATCCATATATCATGGATAAATGAAACTCAGTGTTGGATTGGTCTTCA
CAACAAAACACAGACAAAGAACGTAAAAAGTCTTGTAAGTGGAAACTCAAACGATTCGTT
TCGTCTTCGAACTTACAAAGAATATCAAAGTGATTCCACATCGGCATTACCAACAGCAAC
TAACGGCCGACAATCTTCTCCCTTCCGTCCAAGCTCTGCCACCAAATCGTTCATCAGCAT
AGTAGAGGCTGCACAGATAACAGACACGCCCACAACAACGTCATCAGCGCAGAGGAAACG
CCCACAGTCGGAAGTAACGTCACCTTTCGACACTTCGCATGCGTCACGTTCACCAGATGA
ACCAGAGTTGAAAAAACAGAAATCGATTGAAGATTGCGCAACAACAACAACAAACAAACA
AGAAGAAACAGAAGTCAAACAAACAACAACTAAAGTGAAAAACTCGACTTCCACGTTTCA
TGTTCCAGATGAATGGTAATAATGATGACGTCATACCACGAAGGCGTCATATAAAATGAT
AACCATCATACAATGATGATTTCACATAATGGTGATGTCATGCAAGCATGACGTTATACA
TGGATGACGTCATACATAATCAGTGATGATGTCATGGAAGGTAGAATGATGACATCACAA
TAGTTGAAAAAGCGCGTCTTTTCTAAACGTTTTCAACATCACATGAATAAATATCACATT
TTCTACCCCA
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[2-118] 2.35E-41 - T[259-326] 2.35E-41 |
| Gene3D |
RNaseH_sf (IPR036397) - T[2-129] 3.3E-89 - T[238-331] 3.3E-89 |
| Pfam |
RNase_CAF1 (IPR006941) - T[2-321] 4.2E-68 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[147-237] 3.3E-89 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[165-234] 1.05E-12 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[168-236] 10.841 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PARN_HUMAN | 42.262 % | 257 | 1.48E-80 |
| PNDC1_HUMAN | 30.031 % | 112 | 1.57E-27 |