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TRANSCRIPT CARD

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  1. Clone 'cilv018m14' > 
  2. Clone 'cima007k13' > 
  3. Transcript 'Moocul.CG.ELv1_2.S12...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'KH2012:KH.L122.5.v2....'

Transcript Model

Transcript Id

KH2012:KH.L122.5.v2.A.SL2-1

Possible name(s)

PARN; PNLDC1

Gene model

KH2012:KH.L122.5

Location

KhL122 [28,982 / 33,197]

Sequences

Amino acid sequence

Length: 371

>KH.L122.5.v2.A.SL2-1
CFIIKFTISDTNMDITRANFTETLPIVSKAIDESSFICIDGEFTGLTNHRYNLTSYDSPE
ERYLKLHSNTENFMLLQFGMCTFSWKEDEQKYQVDAFNFYIFPFRSSFPGVPDRIFSCQA
SSLDFLTLQDFDFNKAIKEGIPFLRPSEEASVRSAIEEKQAYRQSTYKSPAKFDGVGRSP
SSKGPSTPITDQKTKDFTEKVVAKIKNFLENTEDSEIVLEPCNSYLRKILFENIPAAFPG
KILVESRTDEQTHQRHIVVVRGASASLQKERNLQAKVKEESNLEEAVGFSKIVKKLSQSQ
KLIVGHNMLLDVFYTIQQFVCPLPDVLEEFKSLVGCVFPKLLDTKLMGSMLPFRVSWCST
YGVVLILLQIS

Nucleotide sequence

Length: 2,430

>KH2012:KH.L122.5.v2.A.SL2-1
ATGCTTTATAATAAAGTTTACAATATCTGATACAAATATGGATATAACACGAGCAAACTT
TACCGAAACTTTACCGATAGTCAGCAAAGCGATTGACGAATCAAGTTTTATCTGCATTGA
TGGGGAATTCACCGGTTTAACGAACCATCGGTATAATTTAACGTCCTATGATTCGCCAGA
GGAACGTTATTTGAAATTGCATTCAAACACAGAAAATTTTATGCTGCTGCAGTTTGGAAT
GTGCACTTTTTCATGGAAGGAAGACGAACAAAAATATCAAGTTGATGCGTTTAACTTTTA
CATCTTCCCGTTCCGTTCCTCGTTTCCTGGAGTTCCTGATCGGATATTTTCATGCCAAGC
TTCAAGTCTTGATTTCTTGACTTTACAAGACTTTGATTTCAACAAAGCAATAAAAGAAGG
GATCCCATTTCTTCGACCAAGTGAAGAAGCTTCTGTTAGATCTGCGATTGAAGAAAAACA
AGCTTATCGTCAATCTACTTACAAATCACCAGCCAAGTTTGACGGCGTTGGTCGTAGCCC
TTCATCCAAAGGGCCTTCCACACCAATCACCGACCAGAAAACGAAAGATTTCACAGAAAA
AGTTGTCGCAAAAATTAAAAACTTTTTGGAAAACACAGAAGATTCGGAAATTGTGTTGGA
ACCATGTAACAGTTATCTAAGAAAAATATTATTTGAGAACATTCCTGCTGCATTTCCCGG
TAAAATCCTGGTCGAGTCGCGCACTGACGAACAGACTCATCAGCGCCACATAGTGGTGGT
ACGTGGTGCGAGCGCCTCGTTACAAAAGGAACGAAACTTACAAGCCAAAGTTAAAGAGGA
AAGCAACCTGGAAGAGGCTGTGGGATTCTCGAAGATTGTTAAGAAACTGAGTCAAAGTCA
AAAACTGATAGTTGGCCATAATATGTTGCTTGATGTCTTTTACACGATACAACAGTTTGT
TTGCCCATTACCCGACGTGCTTGAAGAGTTCAAGTCACTTGTGGGATGTGTGTTTCCTAA
ACTTCTTGACACAAAACTGATGGGGAGCATGCTGCCTTTTAGGGTGAGTTGGTGTTCAAC
ATATGGCGTGGTGTTAATTTTATTGCAAATTTCATAAAAAAAAAAATTATACAAAAATGT
ATTTTTTTTGTAATTTTTTGATTAAAGACTATAGGAAATTTTCACTGCTAACTAGTGGCA
GTATTATAATGAAAATGTACATCAACCCTTTCCTTATATATCCCGACTATGGGCATAAAC
ATTTGTAGTCAATTCAACCAAAGCAATCTTGACCAGGACCTACTATCAACCACAGCACTG
GGTGATATGAACGCGCGTTTACGTGAACCCCCCTTCCAACCGCCGGACATCACGGTACCC
GGTAAATATAACGTGGGGTCAACTAAAAGTCAGGATTCAAACTTACATGAAGCAGCATAT
GATGCCTATGTAACAGGTTCAGCTTTTCTATCAATGGTAAATTACTTGAAGTCGTTTCAA
ACAAATAAAAAGATTCTCACTTCGTTTTCATCTCTTTGTTCATTGATTTCACCTTATGTT
AACAAAGTATTTTTGATGCGAAGTTTTGACATCCCATATTTGAACTTAAGTGGTCCCGAT
TTATCCCCATGTCGGGACCATGTGTTTCACCTTGAGTTCCCTGCGCTGTGGAAATCTAAC
GACCTGCGCCAACTTTTCTCACCTGTTGGCCAAATCCATATATCATGGATAAATGAAACT
CAGTGTTGGATTGGTCTTCACAACAAAACACAGACAAAGAACGTAAAAAGTCTTGTAAGT
GGAAACTCAAACGATTCGTTTCGTCTTCGAACTTACAAAGAATATCAAAGTGATTCCACA
TCGGCATTACCAACAGCAACTAACGGCCGACAATCTTCTCCCTTCCGTCCAAGCTCTGCC
ACCAAATCGTTCATCAGCATAGTAGAGGCTGCACAGATAACAGACACGCCCACAACAACG
TCATCAGCGCAGAGGAAACGCCCACAGTCGGAAGTAACGTCACCTTTCGACACTTCGCAT
GCGTCACGTTCACCAGATGAACCAGAGTTGAAAAAACAGAAATCGATTGAAGATTGCGCA
ACAACAACAACAAACAAACAAGAAGAAACAGAAGTCAAACAAACAACAACTAAAGTGAAA
AACTCGACTTCCACGTTTCATGTTCCAGATGAATGGTAATAATGATGACGTCATACCACG
AAGGCGTCATATAAAATGATAACCATCATACAATGATGATTTCACATAATGGTGATGTCA
TGCAAGCATGACGTTATACATGGATGACGTCATACATAATCAGTGATGATGTCATGGAAG
GTAGAATGATGACATCACAATAGTTGAAAAAGCGCGTCTTTTCTAAACGTTTTCAACATC
ACATGAATAAATATCACATTTTCTACCCCA

InterProScan

SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[13-145] 2.09E-46 - T[286-353] 2.09E-46
Gene3D
RNaseH_sf (IPR036397) - T[14-156] 9.5E-95 - T[265-358] 9.5E-95
Pfam
RNase_CAF1 (IPR006941) - T[15-348] 3.6E-73
Gene3D
R3H_dom_sf (IPR036867) - T[174-264] 9.5E-95
SUPERFAMILY
R3H_dom_sf (IPR036867) - T[192-261] 1.2E-12
ProSiteProfiles
R3H_dom (IPR001374) - T[195-263] 10.841

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PARN_HUMAN 42.33 % 269 8.25E-85
PNDC1_HUMAN 30.031 % 112 2.27E-27